Detailed information on CNT30100296


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9TL00|PSBD_NEPOL, E-value = 1e-64

BLAST vs NONCODE:
NONVVIT000784, E-value = 5e-120

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201936Oryza rufipogonPisum sativum52.4626.5891.49235forward
CNT30284073Oryza rufipogonTriticum aestivum71.6510.295.95321forward
CNT30555990Oryza rufipogonOryza glaberrima71.6520.46100321forward
CNT30257720Oryza rufipogonAvena sativa71.6543.7395.64321forward
CNT30664842Oryza rufipogonTriticum dicoccoides59.3839.1295.49266forward
CNT30351849Oryza rufipogonEragrostis tef24.3327.3996.33109reverse complement
CNT30426340Oryza rufipogonPapaver somniferum71.6540.3892.21321forward
CNT30116821Oryza rufipogonOryza nivara47.3216.5599.53212forward
CNT30175943Oryza rufipogonVigna angularis48.448.8990.32217forward

Expression of CNT30100296

Sequence

>CNT30100296
TCAGCCTCCAGCAATTAGTTCTCTTTAGCTATAAGTAGCAGCACCTCTCCACTCTTCTGGTCTCAGACCAATTTCCTTTGGATCGGAGATGCTCGTCTTG
CATCCTGCGAAATTCAGGCACTGGGAAACGAAGTCATAGGCACGTAGGTTCAGAGCCAGGCCGACTACGCCAATAGCACTCATCCATAAACCGGTGACCG
GTACAAATAGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCAAAAGCGATTAGCGGTGACCATTGAATAAGTTTC
TTCAGCTTGAGTTGGGTTAAAAGCGCGGAAGGTATTTGCACCATCACCGTCCTCAAATAGAGTGTTTTCCACGGTTGCCCCATGAATAGCGCATAGCAGA
GCCGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGATCTAGC