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Detailed information on CNT30100262


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670750Oryza rufipogonSetaria viridis16.8923.4893.5177forward

Expression of CNT30100262

Peptides detected in this lncRNA

>peptide 1 (81 aa)
MHVRVRACVRTCCLISEDQKSKIILRNFSMCSACSEMATDRLPSERDSLKMSTAVGGGAGLAVSACGGSGASMAGAGWYSTC

Sequence

>CNT30100262
GATTAACCTTATTAACCCTCTGTGTTTCGTAATGTTTACGGATTAATTAACTGTTCACAATACAAATACAGTTGGCACAAAATGTGTCCTGCCCAAAAGC
GGGAAGGCAGGAAGGGAAAAATTTGCAGGAACTAACGTGTGGAATCAAAGAATCGTTGCTGCATCCTACCGATGATAGGCTGTGTTAAGAACCACCCCGC
CTCCTCTCCATGCATGTGCGCGTTCGTGCGTGCGTACGTACGTGTTGTTTGATTTCAGAGGATCAGAAGTCGAAGATCATCTTGCGGAACTTCTCCATGT
GCTCGGCCTGCAGCGAGATGGCCACCGACAGGCTGCCGTCGGAGCGGGACAGCTTGAAGATGTCCACGGCGGTGGGCGGCGGCGCCGGCTTGGCGGTCAG
CGCCTGCGGCGGCTCGGGGGCCAGCATGGCGGGCGCCGGCTGGTACTCGACGTGCG