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Detailed information on CNT30100261


BLAST search results

BLAST vs Swiss-Prot:
sp|O49545|BAME1_ARATH, E-value = 3e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552641Oryza rufipogonOryza glaberrima18.1459.598.32119forward

Expression of CNT30100261

Peptides detected in this lncRNA

>peptide 1 (35 aa)
ANASSTWVRSLIPSSRRSTDKPYSWYCLHAHCAKQ*

Sequence

>CNT30100261
CTGCCAACGCATCTTCGACGTGGGTTAGGTCTCTGATCCCCTCATCAAGAAGATCAACTGACAAACCATATTCTTGGTACTGCCTCCATGCCCATTGTGC
CAAGCAATAGTACTCTCCACCATCATTTGCCACTCGACCAGTTATGATTTCCAGAAGGACCACACCAAAGCTGTAGACATCGATCTTCTCGTTTACCTTG
AGCCGATGTCCGTATTCTGCAAAGTGTAAACAATTTAGTGTTTCAGGTAATATGCAAGTATATACTCATCAAAGTTGTTCTTTTCAGCTATCACCTGGTG
CCATGTAGCCAAAAGTTCCAGCTATAGCAGAAAATGACTCGTCGTCTCCAGCTTTGAGAAGAATCTTTGCAAGCCCAAAATCTGCCATCTTTGCTCTGAA
GTTGTGATCCAGAAGGATGTTGGCACACTTGACATCTCGATGCACTATGGGAGGCGAGCAATGGTGATGCATGTAGCAAAGGCCTCTCGCTGAGTCGATG
GCAATTTGCAATCTTGTTGGCCAATCCAGAGGTCCTGGCACACCAATTCTTTCCCTCTGGTGAAGCCATTGATGTAGGCTGCCGTTTTCCATGTACTCGT
AGATCAGAAGCTTTGCCTCTGAACTTGAGATGCAGCATAGAAGCTTGACAATGTTT