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Detailed information on CNT30100132

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30690965	Oryza rufipogon	Oryza sativa	93.28	100	100	680	forward
CNT30369552	Oryza rufipogon	Oryza glumipatula	27.3	58.7	81.41	199	forward

Expression of CNT30100132

Peptides detected in this lncRNA

>peptide 1 (46 aa)
ILRGYKIIIGGQITTSKPTDNPRKSVSHSLLQDRHYKEIHKQIPNP*

>peptide 2 (85 aa)
MRGERRVRGRPLPLLAVVEVLSRRAAGQPLRRGAAMQPLGREPLTRPCAAAASGPRGRGRRKAAMRLRRRGHVTGASGSRWMRQR*

Sequence

>CNT30100132
AAATTCTGAGAGGATACAAAATTATAATTGGAGGACAAATCACAACATCAAAACCGACCGATAATCCCAGAAAATCAGTTTCCCATTCGCTGTTACAAGA
TCGACACTACAAAGAAATACACAAACAAATCCCAAATCCCTAAAAACTAAAGCAGAAGCACCTTCTTCCGCTTCATCTGTCAACGAGCGTCCGCTCTGAA
CATCCCACAACCAATCCCAAATCATCACAAATCTAACCCAAAAACTAAATCCCAATCCAATCGGAATCATTACAAAATCATCCCAAAATAAATCAAGCAC
AGGAGACAATCCAATAATCACATCACAAAATAAATCACACATAAGATGAGAGAAGAGGTGGAAATCACAAAATAAATCACATCACATAGGATATGAGAGG
AGAGAGAAGGGTGAGAGGGAGGCCGCTGCCGCTCCTCGCCGTCGTGGAGGTCCTGAGCCGCCGCGCCGCTGGGCAGCCGCTGCGTCGAGGAGCCGCAATG
CAGCCGCTGGGCCGGGAGCCGCTAACCCGCCCCTGCGCCGCTGCTGCCTCTGGACCAAGAGGGAGAGGGAGGAGGAAGGCGGCGATGAGGCTGAGGAGGC
GTGGCCACGTGACGGGGGCCAGTGGCAGTAGGTGGATGCGACAGAGGTAGGGATGGTGGTGGCAAGGAGATGGTGTGCGGTGGCGCTGACGGTGGGTGGG
AGTGTGGCGGCTGTGGTCTGTGGATAAGG