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Detailed information on CNT30100118


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30369498Oryza rufipogonOryza glumipatula101.3267.198.141073forward

Expression of CNT30100118

Peptides detected in this lncRNA

>peptide 1 (43 aa)
YLLLAQSKNTNPQLISMREKKEDNQTSTDVLNEIHHCEDLIHS*

Sequence

>CNT30100118
TCTACTTATTACTTGCACAAAGTAAGAACACAAATCCACAGCTAATCAGCATGAGAGAAAAAAAAGAAGATAACCAAACATCCACTGATGTGTTGAATGA
AATTCACCACTGCGAGGATCTGATACATAGTTGATTTGATTACCCGATAAGATCTATATATATCTTACAGACGAACAGAAAGATAACACCTAACATAACT
TAATTACTGATAATAAGAACTATATATGTCTTGCATTTGACACTGGACATAATACCTAACACGAATTTAGTGCTACTATTCTTCACCTGACATTGAACTC
ACGCTCACCAAACCACAAATCACAATCACTACCGACGAATTATTCATCTAACCAAACCTCTACTATTATTACCACTACTGCTGTACTAACAGATCAGCAA
CACCAAGCCAGCCTAAATTTCCACCAAACTAACCCCAATTTTTCCCAACCAAGACACCACCTAAAAACCAAACTCAAAAGACAAAGAACTAATCAACCTA
GTGTTGTTCTTCGTAGAAGCAAACCCCCAACATAATTCCACCACGATACTTTTGAAAACCTAACCACTACCAAATCCAACCACCGGCAGATGCGTTCCCC
CAAACTCGTCCTCTGAAAAAATACCGGGAGAGTTTGATCGGAACGCAGCCGGGATCTGATCCGGACAAGCTTTCGATCGGATCGAAACCACCAAGCAATC
CATCCATCAGAGAAGAGGAGGAGAAACGAGGAGAGGAGCGTGCACGGCTCACGGCTCCGGGGAAGACGGCGGTGAGAGAGGGAGCTCGGCTCAGGCGAAG
CCGAGGAGAAGGCCGGGCCGGCGTAGACTGGCGCGTCGGCGACGGACTTGATCTTCGTCGGCACAGCGGCCGTGTGCTGCTGCTGCTTCGATCTGGCGGG
GCGAGGCGCCTTCTGGTCAGTCGGCGCGGCTTGCGCCACAGCCGGAACACGGGGCGCCCGCTGGTCAACCGCCGCGGCCTGCGCCGCAACCGGAGCTGGC
GACGGCGAGGAAACCGGCGGCTCCTCGCCGCGCTTGAGGATCCGGATCTCCCCCATCAC