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Detailed information on CNT30100099


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0JC10|DCAM_ORYSJ, E-value = 5e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30290085Oryza rufipogonTriticum aestivum28.4115.3286.58231forward

Expression of CNT30100099

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MTCIIFPTLKFDIRIHFAHCGRQSRPRRALLFRIYAR*

>peptide 2 (38 aa)
MMSEIPESLVISLAHVVCPSAEVLKKTEAFFLSSPVMHI

>peptide 3 (80 aa)
MQNRSWRPGGDFSSSSEALVNEQTPRRQLLLNHVAARIGPDIQPLGPGPCMVTIGKGSRVEAHDLVAGIAEAILRSHMNG*

Sequence

>CNT30100099
TGACAATGCCGACATTATTATAAAATGACTTGTATTATATTCCCAACATTAAAGTTTGATATTCGGATACATTTTGCTCACTGTGGCAGACAAAGCAGAC
CACGTAGAGCCCTTTTATTCAGAATATATGCAAGATAATAAAGAACATTGGTCATAGCATATACTAGTACTATATGAATAGTCTGGCTGGCTGCTTCACA
AAGTAACAGAGTGATCGCTACTGGAGTTTTGAGTATTCTTTAATCTTCAGTGCGCTTCCCTCATCAGCAGCTCCTCATCTTCTTACCCTCTGTGCCATCT
ATCTCCTCGACAGCATCGTCTTCCCAGTAGAGAGCCTCCATTTTACCAGCTTTCTCCGTGTTTTCATCAGCAAAGCAATGCAGAACAGATCGTGGCGACC
CGGTGGCGATTTCAGCAGTAGCAGTGAAGCTCTGGTAAATGAGCAAACCCCCAGAAGGCAGCTCCTGCTCAACCATGTTGCTGCAAGAATAGGCCCCGAC
ATCCAGCCCCTTGGCCCAGGTCCCTGCATGGTCACCATAGGCAAGGGAAGCAGGGTTGAAGCCCATGACCTCGTAGCTGGCATAGCTGAAGCCATCCTCA
GGAGTCACATGAATGGTTGAGAAAGCAGGGCCGTGGATGGCATTCATGGAGTAGCCGCAGGGCTCGAAATCGAAGTCGCAGACTTCCATCTCTGGGATGA
TGTCAGAGATACCTGAGAGCTTGGTCATTTCCTTAGCACATGTTGTGTGTCCATCAGCAGAAGTCTTGAAGAAGACAGAAGCTTTCTTCTTGTCCAGCCC
AGTCATGCACATC