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Detailed information on CNT30100030


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690334Oryza rufipogonOryza sativa82.1498.8100492forward

Expression of CNT30100030

Peptides detected in this lncRNA

>peptide 1 (35 aa)
PRHTNCRDVDPNSTCGDRRHSLLLATLRLQLPRLG*

Sequence

>CNT30100030
CCACGCCACACTAACTGCCGAGATGTCGATCCCAATTCCACGTGTGGCGACCGGCGACACAGCTTGTTGCTTGCGACTCTGAGGCTGCAGCTGCCTCGCC
TCGGTTAGCTCTTGGCTCCTGCTTTCCCCCTCCTCGTCCGCTCGTCATCCTCGACTTGACCCTCGACAGTTCATCCTCAGACTGATTAGTTAACTATATG
GTCAACAGCTTCACCTTAATTCCTGTGCCACCGGCTGCTGCTATTATGTAGTAGTAGTATGTGATGGTTTTCGTTCGCACGTCCAGTTGCATGTACTTTA
CAAGATAGGCGTACCGCAACATGTACACTATAGACTACTTATCCTCGGTCGACGTGTCTTCTCCTGCTTCATATGTTTCCGCCGGTTGATGCTTTTATAT
GGACTTTCTTCTAGAGACACCATATTTCTGTTATATCATGCATGAGTGTTGTCTAAGTTTCTATATTTAATTAGTAAACTAACTGGATTTTGCTAAGAAA
ATTGCATGGACCAAGGTCTAAATTTAGTTGGAAGTAATACTGTATTAATTTGATATATACCTTTGTTTCTATTTCTGTAAATATATACAGCTGTATTTT