SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3407 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30511680 Solanum lycopersicum 12:2922813-2923602 (+) noncoding (-0.0446464)3e-17 (sp|P14009|14KD_DAUCA) 63 9.13 2
CNT30511679 Solanum lycopersicum 12:19003210-19049628 (-) noncoding (-0.014336)- 80 4.31 2
CNT30511678 Solanum lycopersicum 12:46755360-46756519 (-) noncoding (-0.151552)- 62 47.73 2
CNT30511676 Solanum lycopersicum 12:53394606-53397388 (+) noncoding (-0.385024)- - 14.88 2
CNT30511675 Solanum lycopersicum 12:52954874-52962182 (+) noncoding (-0.0004096)- 49 18.29 2
CNT30511673 Solanum lycopersicum 12:4704371-4706084 (+) coding (0.247)- 85 1.57 4
CNT30511672 Solanum lycopersicum 12:18850536-18860989 (+) noncoding (-0.032768)- 76 2.75 2
CNT30511671 Solanum lycopersicum 12:4741141-4741639 (+) noncoding (-0.0004096)- 93 912.36 1
CNT30511670 Solanum lycopersicum 12:51634693-51636838 (+) noncoding (-0.0004096)- 65 6.6 2
CNT30511669 Solanum lycopersicum 12:29074050-29084043 (+) noncoding (-0.0004096)- 58 32.95 3
CNT30511668 Solanum lycopersicum 12:60349994-60355368 (+) noncoding (-0.012288)3e-25 (sp|Q3C1M2|RR11_NICSY) 37 675.71 2
CNT30511667 Solanum lycopersicum 12:66532419-66532862 (-) noncoding (-0.0004096)- 33 6.4 1
CNT30511666 Solanum lycopersicum 12:23475511-23482189 (+) noncoding (-0.049152)- 72 25.07 2
CNT30511665 Solanum lycopersicum 12:65249330-65249986 (+) noncoding (-0.168755)2e-41 (sp|C0LGK4|Y2165_ARATH) 71 6.08 2
CNT30511664 Solanum lycopersicum 12:54762229-54763851 (-) noncoding (-0.237568)- 53 3.99 4
CNT30511662 Solanum lycopersicum 12:65161818-65162432 (+) noncoding (-0.0110592)- 57 28 2
CNT30511661 Solanum lycopersicum 12:29074017-29084048 (+) noncoding (-0.0004096)- 58 94.07 3
CNT30511657 Solanum lycopersicum 12:2922813-2923602 (+) noncoding (-0.0294912)2e-17 (sp|P14009|14KD_DAUCA) - 6.31 3
CNT30511656 Solanum lycopersicum 12:1549523-1550021 (-) noncoding (-0.0626688)- 39 33.44 2
CNT30511655 Solanum lycopersicum 12:53825860-53828845 (+) noncoding (-0.0077824)3e-42 (sp|P31843|RRPO_OENBE) 60 7.25 1
CNT30511654 Solanum lycopersicum 12:23475578-23478236 (+) noncoding (-0.02048)- 55 6.32 2
CNT30511653 Solanum lycopersicum 12:66145049-66145712 (+) noncoding (-0.049152)- 61 25.17 2
CNT30511652 Solanum lycopersicum 12:2922825-2923602 (+) noncoding (-0.0598016)2e-16 (sp|P14009|14KD_DAUCA) 63 0.88 2
CNT30511651 Solanum lycopersicum 12:47782779-47783249 (-) noncoding (-0.032768)- 48 57.6 1Conserved counterparts:
CNT30511650 Solanum lycopersicum 12:5556540-5557727 (-) noncoding (-0.012288)- 48 15.73 2
CNT30511649 Solanum lycopersicum 12:49218006-49220244 (-) noncoding (-0.094208)- 41 0.77 2
CNT30511648 Solanum lycopersicum 12:64930382-64931336 (+) noncoding (-0.032768)0.0000000002 (sp|P05993|PAPA5_CARPA) 95 137.92 2
CNT30511647 Solanum lycopersicum 12:67658851-67659946 (-) noncoding (-0.0004096)0.00000000000006 (sp|Q8GW48|HSBP_ARATH) 60 39.63 2Conserved counterparts:
CNT30511646 Solanum lycopersicum 12:37848164-37852790 (+) noncoding (-0.057344)- 63 5.25 1
CNT30511645 Solanum lycopersicum 12:11255763-11258201 (-) noncoding (-0.065536)- 57 5.95 2
CNT30511644 Solanum lycopersicum 12:64026684-64032562 (+) noncoding (-0.006144)- 39 2.98 4
CNT30511643 Solanum lycopersicum 12:50665346-50665827 (+) noncoding (-0.0004096)- 61 6.07 1
CNT30511642 Solanum lycopersicum 12:43839984-43840413 (+) coding (0.03)- 70 5.02 2
CNT30511641 Solanum lycopersicum 12:3871061-3871819 (+) noncoding (-0.008192)- 46 1.79 3
CNT30511640 Solanum lycopersicum 12:52099832-52107174 (+) noncoding (-0.094208)- 36 6.13 2
CNT30511639 Solanum lycopersicum 12:4728638-4734841 (+) noncoding (-0.06144)- 35 17.28 2
CNT30511638 Solanum lycopersicum 12:51294853-51296012 (+) noncoding (-0.192512)- 68 16 2
CNT30511637 Solanum lycopersicum 12:30053937-30056581 (+) noncoding (-0.04096)- - 2.74 2
CNT30511636 Solanum lycopersicum 12:43541954-43545047 (-) noncoding (-0.0004096)- 32 7.76 2
CNT30511635 Solanum lycopersicum 12:43153763-43157930 (-) noncoding (-0.0004096)- 71 7.72 4
CNT30511634 Solanum lycopersicum 12:19860125-19862641 (-) noncoding (-0.02048)- 45 7.45 2
CNT30511633 Solanum lycopersicum 12:3871060-3871639 (+) noncoding (-0.189235)- 45 0.28 2
CNT30511632 Solanum lycopersicum 12:43068951-43071412 (-) noncoding (-0.08192)- 63 8.62 1
CNT30511631 Solanum lycopersicum 12:67928341-67928891 (+) noncoding (-0.036864)1e-34 (sp|Q9LHJ8|SAP5_ARATH) 86 248.64 2Conserved counterparts:
CNT30511630 Solanum lycopersicum 11:3466489-3466828 (+) noncoding (-0.118784)- - 12.03 2
CNT30511629 Solanum lycopersicum 11:17584478-17585644 (-) noncoding (-0.0344064)- 57 4.02 1
CNT30511628 Solanum lycopersicum 11:21381329-21382408 (+) noncoding (-0.0004096)- 33 5.4 2
CNT30511627 Solanum lycopersicum 11:31684767-31686151 (-) noncoding (-0.016384)- 49 31.59 2
CNT30511625 Solanum lycopersicum 11:51148220-51149437 (+) noncoding (-0.0913408)- 73 5.62 2
CNT30511624 Solanum lycopersicum 11:1380528-1381104 (-) noncoding (-0.0585728)- 64 15.19 2