SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3672 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Additional notes
CNT30100780 Oryza rufipogon 3:27859590-27860145 (-) noncoding (-0.06144)- 59 25.96 1
CNT30100778 Oryza rufipogon 3:20706209-20707460 (+) noncoding (-0.098304)- 57 1.66 2
CNT30100776 Oryza rufipogon 3:7181277-7181716 (+) noncoding (-0.0135168)- 79 37.24 2Conserved counterparts: CNT30693495
CNT30100775 Oryza rufipogon 3:31180056-31190596 (+) noncoding (-0.049152)- 85 2.86 2Conserved counterparts: CNT30595998, CNT30603900
CNT30100774 Oryza rufipogon 3:21007579-21009416 (+) noncoding (-0.0004096)- - 19.67 2
CNT30100773 Oryza rufipogon 3:9909961-9915216 (-) noncoding (-0.02048)- 84 2.41 8
CNT30100771 Oryza rufipogon 3:14492643-14493602 (-) NA (0)- 66 19.08 1
CNT30100768 Oryza rufipogon 3:196102-196833 (-) noncoding (-0.063488)3e-33 (sp|Q39176|ERLI1_ARATH) 87 8.67 2Conserved counterparts: CNT30575695, CNT30691960
CNT30100765 Oryza rufipogon 3:195545-196834 (-) noncoding (-0.0405504)3e-19 (sp|P14009|14KD_DAUCA) 94 1.06 3Conserved counterparts: CNT30575856, CNT30691960
CNT30100764 Oryza rufipogon 3:12899634-12899939 (-) coding (0.444)- 89 0.74 2Conserved counterparts: CNT30450016
CNT30100763 Oryza rufipogon 3:22293840-22294786 (-) coding (0.254)- 99 2.72 2Conserved counterparts: CNT30692455
CNT30100761 Oryza rufipogon 3:3721975-3722592 (-) noncoding (-0.0503808)3e-131 (sp|O64937|EF1A_ORYSJ) 82 572.78 2Conserved counterparts: CNT30228831, CNT30449969, CNT30724026, CNT30160120, CNT3074067, CNT30614135, CNT30568730, CNT30509929, CNT3015747, CNT30146188, CNT30644842, CNT30377782, CNT30424546, CNT30203418
CNT30100760 Oryza rufipogon 3:7515402-7516416 (+) noncoding (-0.094208)- 74 0.9 3Conserved counterparts: CNT30595884
CNT30100759 Oryza rufipogon 3:9699149-9699487 (-) noncoding (-0.0585728)- 49 0 2
CNT30100757 Oryza rufipogon 3:3819387-3819599 (+) noncoding (-0.0004096)- 45 5.83 1
CNT30100756 Oryza rufipogon 3:3821254-3821455 (-) noncoding (-0.171213)- 66 13.83 1
CNT30100754 Oryza rufipogon 3:18388930-18390229 (-) noncoding (-0.0118784)5e-83 (sp|P00155|CYF_PEA) 60 30.5 1
CNT30100753 Oryza rufipogon 3:28035357-28035886 (+) noncoding (-0.057344)- 60 0 2Conserved counterparts: CNT30575871, CNT30595975, CNT30691875
CNT30100752 Oryza rufipogon 3:28418375-28420075 (-) noncoding (-0.053248)- 49 5.28 2
CNT30100749 Oryza rufipogon 3:15670046-15670622 (+) noncoding (-0.053248)- 35 10.1 2
CNT30100748 Oryza rufipogon 3:12786513-12787149 (-) noncoding (-0.014336)- 33 104.55 2Conserved counterparts: CNT30603819
CNT30100747 Oryza rufipogon 3:31950109-31981196 (-) noncoding (-0.04096)- 69 0 2Conserved counterparts: CNT30577845, CNT30696366
CNT30100745 Oryza rufipogon 3:27999976-28001549 (-) noncoding (-0.10199)- 98 17.61 2Conserved counterparts: CNT30445643, CNT30575848, CNT30595858, CNT30597
CNT30100744 Oryza rufipogon 3:18069176-18071119 (-) noncoding (-0.0172032)- 92 6.84 3Conserved counterparts: CNT30575679, CNT30603650
CNT30100741 Oryza rufipogon 3:26521945-26527620 (-) noncoding (-0.0811008)- 66 9.38 2Conserved counterparts: CNT30575620, CNT30692252
CNT30100740 Oryza rufipogon 3:5670449-5671333 (-) noncoding (-0.0987136)- - 16.01 2
CNT30100739 Oryza rufipogon 3:3850528-3851108 (-) coding (0.307)3e-64 (sp|Q10QW3|TI11B_ORYSJ) 52 4.22 2
CNT30100738 Oryza rufipogon 3:15712299-15712933 (+) noncoding (-0.156467)- 70 0.42 2Conserved counterparts: CNT30445673, CNT3016329
CNT30100736 Oryza rufipogon 3:11268404-11269127 (+) noncoding (-0.0004096)- 36 10.52 2
CNT30100734 Oryza rufipogon 3:19484427-19484659 (+) noncoding (-0.0004096)- - 0.38 1Conserved counterparts: CNT30692039
CNT30100733 Oryza rufipogon 3:30808860-30811086 (+) noncoding (-0.094208)- 83 1.52 2Conserved counterparts: CNT30575721
CNT30100731 Oryza rufipogon 3:196042-196663 (-) noncoding (-0.166707)7e-19 (sp|Q39176|ERLI1_ARATH) 88 6.77 2Conserved counterparts: CNT30575905, CNT30691960
CNT30100730 Oryza rufipogon 3:11910707-11911109 (-) coding (0.181)5e-32 (sp|Q9SCZ4|FERON_ARATH) 93 0.77 2
CNT30100729 Oryza rufipogon 3:8988063-8989470 (+) noncoding (-0.0106496)1e-79 (sp|Q8LF20|CAP2_ARATH) 84 58.15 3Conserved counterparts: CNT30575633, CNT30692389
CNT30100728 Oryza rufipogon 3:15165532-15169409 (+) noncoding (-0.12329)- 91 6.6 2Conserved counterparts: CNT30467553, CNT30578566, CNT30521542, CNT30692114
CNT30100726 Oryza rufipogon 3:32087304-32110411 (-) noncoding (-0.0135168)- 66 456.91 2
CNT30100725 Oryza rufipogon 3:28035366-28035862 (+) noncoding (-0.0503808)- 57 0 2Conserved counterparts: CNT30575871, CNT30595975, CNT30691771
CNT30100719 Oryza rufipogon 3:34219423-34221258 (-) coding (0.216)- 66 8.49 2
CNT30100715 Oryza rufipogon 3:3818427-3819910 (-) noncoding (-0.0004096)- 52 32.19 3
CNT30100712 Oryza rufipogon 3:26046250-26048653 (-) noncoding (-0.028672)- 61 0.79 2Conserved counterparts: CNT30575809
CNT30100711 Oryza rufipogon 3:7810044-7817468 (+) noncoding (-0.094208)0.00000000003 (sp|Q10RB4|BGAL5_ORYSJ) 48 1.86 8Conserved counterparts: CNT301875, CNT30691723
CNT30100709 Oryza rufipogon 3:6841619-6854845 (-) noncoding (-0.0004096)- 62 2.34 2
CNT30100707 Oryza rufipogon 3:13512878-13513574 (-) noncoding (-0.179814)- 63 26.53 2
CNT30100706 Oryza rufipogon 3:3108806-3112081 (+) coding (0.027)- 89 16.82 2
CNT30100705 Oryza rufipogon 3:33540680-33541125 (-) noncoding (-0.0344064)- 95 7.45 2
CNT30100703 Oryza rufipogon 3:3820011-3820811 (-) coding (0.2)- - 5.81 3
CNT30100701 Oryza rufipogon 3:3132407-3134892 (+) coding (0.111)- 76 3.04 2Conserved counterparts: CNT30575501
CNT30100700 Oryza rufipogon 3:9909965-9915259 (-) noncoding (-0.022528)- 93 48.23 8
CNT30100699 Oryza rufipogon 3:5042972-5044146 (-) coding (0.181)- 73 170.2 3Conserved counterparts: CNT30575527, CNT30596039, CNT30603857, CNT30692428
CNT30100698 Oryza rufipogon 3:22073825-22074463 (-) noncoding (-0.012288)- 36 6.52 2