CNCI status: | # |
Max. peptide length: | # |
Is conserved: | # |
Organ specific: | # |
Max. expression: | # |
No. of exons: | # |
Order by: | lncRNA ID |
Record details | CANTATAdb ID | Species | Location | CNCI status (score) | Swiss-Prot best hit | Max. peptide length | Max. expression | No. of exons | Additional notes |
---|---|---|---|---|---|---|---|---|---|
CNT30508616 | Solanum lycopersicum | 1:94715264-94715792 (-) | noncoding (-0.0004096) | - | 44 | 5.76 | 1 | ||
CNT30508615 | Solanum lycopersicum | 1:11992327-11992732 (+) | noncoding (-0.0004096) | - | 87 | 9.92 | 2 | ||
CNT30508614 | Solanum lycopersicum | 1:16669524-16670307 (+) | noncoding (-0.016384) | - | 82 | 6.32 | 2 | ||
CNT30508613 | Solanum lycopersicum | 1:52008233-52008871 (-) | noncoding (-0.126976) | - | - | 5.94 | 1 | ||
CNT30508612 | Solanum lycopersicum | 1:6501718-6504479 (+) | noncoding (-0.0004096) | - | 83 | 57.42 | 3 | Conserved counterparts: CNT3096735 Expressed preferentially in root |
|
CNT30508611 | Solanum lycopersicum | 1:88310717-88327268 (-) | noncoding (-0.047104) | - | 52 | 2.73 | 3 | Conserved counterparts: CNT3090452 Expressed preferentially in root |
|
CNT30508609 | Solanum lycopersicum | 1:57920706-57921670 (+) | noncoding (-0.0004096) | - | 47 | 4.88 | 2 | ||
CNT30508608 | Solanum lycopersicum | 1:88310717-88327268 (-) | noncoding (-0.233472) | - | 52 | 111.36 | 2 | Conserved counterparts: CNT3090452 Expressed preferentially in root |
|
CNT30508607 | Solanum lycopersicum | 1:23793892-23794677 (+) | noncoding (-0.0004096) | 0.000000001 (sp|P28804|RK32_SPIOL) | 35 | 137.15 | 1 | Conserved counterparts: CNT3091196 Expressed preferentially in root |
|
CNT30508606 | Solanum lycopersicum | 1:14721469-14728071 (+) | noncoding (-0.110592) | - | 35 | 8.25 | 2 | ||
CNT30508605 | Solanum lycopersicum | 1:89369751-89369982 (+) | noncoding (-0.0004096) | - | 51 | 11.52 | 1 | ||
CNT30508604 | Solanum lycopersicum | 1:70757633-70760030 (-) | noncoding (-0.220365) | - | 98 | 34.73 | 1 | Expressed preferentially in root | |
CNT30508603 | Solanum lycopersicum | 1:57674803-57676430 (+) | noncoding (-0.0004096) | - | 33 | 13.1 | 2 | Expressed preferentially in fruit | |
CNT30508602 | Solanum lycopersicum | 1:75226196-75226810 (-) | noncoding (-0.147456) | - | 43 | 10.86 | 2 | ||
CNT30508601 | Solanum lycopersicum | 1:73217030-73217436 (-) | noncoding (-0.0004096) | - | 52 | 7.01 | 1 | ||
CNT30508599 | Solanum lycopersicum | 1:57594419-57595748 (-) | coding (0.341) | - | 93 | 0.48 | 2 | ||
CNT30508598 | Solanum lycopersicum | 1:53258988-53288013 (-) | noncoding (-0.0466944) | 0 (sp|P29162|ASOL_TOBAC) | 73 | 0.41 | 4 | Conserved counterparts: CNT3090084, CNT3085930, CNT30426927 Expressed preferentially in root |
|
CNT30508597 | Solanum lycopersicum | 1:54963548-54963978 (-) | noncoding (-0.0004096) | - | - | 105.3 | 1 | ||
CNT30508596 | Solanum lycopersicum | 1:83273326-83274130 (+) | noncoding (-0.0004096) | - | 83 | 1.84 | 2 | Conserved counterparts: CNT3090466 | |
CNT30508595 | Solanum lycopersicum | 1:70339515-70342453 (-) | noncoding (-0.0004096) | - | 46 | 17.14 | 2 | ||
CNT30508594 | Solanum lycopersicum | 1:6501718-6507054 (+) | noncoding (-0.0004096) | - | 48 | 7.53 | 3 | Conserved counterparts: CNT3097948 Expressed preferentially in root |
|
CNT30508593 | Solanum lycopersicum | 1:32573757-32574316 (-) | noncoding (-0.0569344) | - | 83 | 8.48 | 2 | Expressed preferentially in root | |
CNT30508592 | Solanum lycopersicum | 1:89264360-89265283 (-) | noncoding (-0.0004096) | - | 58 | 77.27 | 3 | Expressed preferentially in leaf | |
CNT30508591 | Solanum lycopersicum | 1:88310719-88327268 (-) | noncoding (-0.233472) | - | 52 | 1.11 | 3 | Conserved counterparts: CNT3090452 Expressed preferentially in root |
|
CNT30508590 | Solanum lycopersicum | 1:36812340-36813484 (-) | noncoding (-0.008192) | - | 84 | 3.61 | 2 | ||
CNT30508589 | Solanum lycopersicum | 1:11583443-11585431 (-) | noncoding (-0.0241664) | - | 85 | 12.09 | 3 | ||
CNT30508588 | Solanum lycopersicum | 1:53402389-53405573 (-) | noncoding (-0.110592) | - | 45 | 20.76 | 2 | ||
CNT30508587 | Solanum lycopersicum | 1:88835907-88838289 (+) | noncoding (-0.0446464) | - | 44 | 4.75 | 3 | ||
CNT30508586 | Solanum lycopersicum | 1:24232948-24235255 (+) | noncoding (-0.045056) | - | 70 | 8.38 | 3 | ||
CNT30508585 | Solanum lycopersicum | 1:45035543-45039978 (+) | noncoding (-0.0004096) | 5e-18 (sp|P0C2F6|RNHX1_ARATH) | 77 | 9.32 | 1 | Expressed preferentially in leaf | |
CNT30508583 | Solanum lycopersicum | 1:93650318-93652051 (-) | noncoding (-0.0004096) | 0.00000006 (sp|Q6Z244|ODD19_ORYSJ) | 84 | 8.83 | 2 | Expressed preferentially in root | |
CNT30508582 | Solanum lycopersicum | 1:75128708-75133807 (-) | coding (0.027) | - | 72 | 21.27 | 3 | ||
CNT30508581 | Solanum lycopersicum | 1:21842278-21843751 (-) | noncoding (-0.004096) | - | 51 | 21.9 | 1 | Expressed preferentially in root | |
CNT30508580 | Solanum lycopersicum | 1:63497833-63501001 (+) | noncoding (-0.012288) | - | 93 | 18.92 | 2 | Conserved counterparts: CNT3097484 Expressed preferentially in leaf |
|
CNT30508579 | Solanum lycopersicum | 1:23860554-23860976 (+) | noncoding (-0.0004096) | - | 55 | 162.47 | 1 | Expressed preferentially in root | |
CNT30508578 | Solanum lycopersicum | 1:96127546-96127813 (+) | noncoding (-0.0004096) | - | - | 837.08 | 1 | Expressed preferentially in fruit | |
CNT30508577 | Solanum lycopersicum | 1:75128708-75133840 (-) | coding (0.027) | - | 62 | 5.05 | 2 | ||
CNT30508576 | Solanum lycopersicum | 1:92656406-92658202 (+) | noncoding (-0.0208896) | - | 73 | 6.49 | 2 | Expressed preferentially in root | |
CNT30508575 | Solanum lycopersicum | 1:88313568-88327268 (-) | noncoding (-0.233472) | - | 52 | 2.75 | 3 | Conserved counterparts: CNT3090003 Expressed preferentially in root |
|
CNT30508574 | Solanum lycopersicum | 1:88313550-88327268 (-) | noncoding (-0.233472) | - | 87 | 0.94 | 4 | Conserved counterparts: CNT3090003 Expressed preferentially in root |
|
CNT30508573 | Solanum lycopersicum | 1:59906206-59907630 (-) | noncoding (-0.0311296) | - | 59 | 7.73 | 2 | ||
CNT30508572 | Solanum lycopersicum | 1:6423095-6426125 (-) | noncoding (-0.0004096) | - | 59 | 8.96 | 2 | Expressed preferentially in root | |
CNT30508571 | Solanum lycopersicum | 1:70809904-70811313 (-) | noncoding (-0.0004096) | - | 81 | 7.7 | 3 | ||
CNT30508570 | Solanum lycopersicum | 1:27463988-27468120 (-) | noncoding (-0.0417792) | - | 89 | 18.36 | 2 | ||
CNT30508569 | Solanum lycopersicum | 1:70619688-70622138 (-) | noncoding (-0.0200704) | - | 60 | 15.61 | 1 | ||
CNT30508568 | Solanum lycopersicum | 1:97973656-97974350 (+) | noncoding (-0.028672) | - | 56 | 67.1 | 1 | ||
CNT30508567 | Solanum lycopersicum | 1:61411026-61414338 (+) | noncoding (-0.073728) | - | 32 | 12.71 | 2 | ||
CNT30508566 | Solanum lycopersicum | 1:76371610-76373067 (+) | noncoding (-0.0090112) | 2e-40 (sp|Q8VY21|TLP3_ARATH) | 53 | 15.36 | 2 | Expressed preferentially in root | |
CNT30508565 | Solanum lycopersicum | 1:72607509-72610177 (-) | noncoding (-0.08192) | - | 55 | 5.18 | 2 | ||
CNT30508564 | Solanum lycopersicum | 1:88310719-88327268 (-) | noncoding (-0.036864) | - | 89 | 0.4 | 5 | Conserved counterparts: CNT3090003 Expressed preferentially in root |