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lncRNA id
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Found 3407 records

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Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Additional notes
CNT30508616 Solanum lycopersicum 1:94715264-94715792 (-) noncoding (-0.0004096)- 44 5.76 1
CNT30508615 Solanum lycopersicum 1:11992327-11992732 (+) noncoding (-0.0004096)- 87 9.92 2
CNT30508614 Solanum lycopersicum 1:16669524-16670307 (+) noncoding (-0.016384)- 82 6.32 2
CNT30508613 Solanum lycopersicum 1:52008233-52008871 (-) noncoding (-0.126976)- - 5.94 1
CNT30508612 Solanum lycopersicum 1:6501718-6504479 (+) noncoding (-0.0004096)- 83 57.42 3Conserved counterparts: CNT3096735
Expressed preferentially in root
CNT30508611 Solanum lycopersicum 1:88310717-88327268 (-) noncoding (-0.047104)- 52 2.73 3Conserved counterparts: CNT3090452
Expressed preferentially in root
CNT30508609 Solanum lycopersicum 1:57920706-57921670 (+) noncoding (-0.0004096)- 47 4.88 2
CNT30508608 Solanum lycopersicum 1:88310717-88327268 (-) noncoding (-0.233472)- 52 111.36 2Conserved counterparts: CNT3090452
Expressed preferentially in root
CNT30508607 Solanum lycopersicum 1:23793892-23794677 (+) noncoding (-0.0004096)0.000000001 (sp|P28804|RK32_SPIOL) 35 137.15 1Conserved counterparts: CNT3091196
Expressed preferentially in root
CNT30508606 Solanum lycopersicum 1:14721469-14728071 (+) noncoding (-0.110592)- 35 8.25 2
CNT30508605 Solanum lycopersicum 1:89369751-89369982 (+) noncoding (-0.0004096)- 51 11.52 1
CNT30508604 Solanum lycopersicum 1:70757633-70760030 (-) noncoding (-0.220365)- 98 34.73 1Expressed preferentially in root
CNT30508603 Solanum lycopersicum 1:57674803-57676430 (+) noncoding (-0.0004096)- 33 13.1 2Expressed preferentially in fruit
CNT30508602 Solanum lycopersicum 1:75226196-75226810 (-) noncoding (-0.147456)- 43 10.86 2
CNT30508601 Solanum lycopersicum 1:73217030-73217436 (-) noncoding (-0.0004096)- 52 7.01 1
CNT30508599 Solanum lycopersicum 1:57594419-57595748 (-) coding (0.341)- 93 0.48 2
CNT30508598 Solanum lycopersicum 1:53258988-53288013 (-) noncoding (-0.0466944)0 (sp|P29162|ASOL_TOBAC) 73 0.41 4Conserved counterparts: CNT3090084, CNT3085930, CNT30426927
Expressed preferentially in root
CNT30508597 Solanum lycopersicum 1:54963548-54963978 (-) noncoding (-0.0004096)- - 105.3 1
CNT30508596 Solanum lycopersicum 1:83273326-83274130 (+) noncoding (-0.0004096)- 83 1.84 2Conserved counterparts: CNT3090466
CNT30508595 Solanum lycopersicum 1:70339515-70342453 (-) noncoding (-0.0004096)- 46 17.14 2
CNT30508594 Solanum lycopersicum 1:6501718-6507054 (+) noncoding (-0.0004096)- 48 7.53 3Conserved counterparts: CNT3097948
Expressed preferentially in root
CNT30508593 Solanum lycopersicum 1:32573757-32574316 (-) noncoding (-0.0569344)- 83 8.48 2Expressed preferentially in root
CNT30508592 Solanum lycopersicum 1:89264360-89265283 (-) noncoding (-0.0004096)- 58 77.27 3Expressed preferentially in leaf
CNT30508591 Solanum lycopersicum 1:88310719-88327268 (-) noncoding (-0.233472)- 52 1.11 3Conserved counterparts: CNT3090452
Expressed preferentially in root
CNT30508590 Solanum lycopersicum 1:36812340-36813484 (-) noncoding (-0.008192)- 84 3.61 2
CNT30508589 Solanum lycopersicum 1:11583443-11585431 (-) noncoding (-0.0241664)- 85 12.09 3
CNT30508588 Solanum lycopersicum 1:53402389-53405573 (-) noncoding (-0.110592)- 45 20.76 2
CNT30508587 Solanum lycopersicum 1:88835907-88838289 (+) noncoding (-0.0446464)- 44 4.75 3
CNT30508586 Solanum lycopersicum 1:24232948-24235255 (+) noncoding (-0.045056)- 70 8.38 3
CNT30508585 Solanum lycopersicum 1:45035543-45039978 (+) noncoding (-0.0004096)5e-18 (sp|P0C2F6|RNHX1_ARATH) 77 9.32 1Expressed preferentially in leaf
CNT30508583 Solanum lycopersicum 1:93650318-93652051 (-) noncoding (-0.0004096)0.00000006 (sp|Q6Z244|ODD19_ORYSJ) 84 8.83 2Expressed preferentially in root
CNT30508582 Solanum lycopersicum 1:75128708-75133807 (-) coding (0.027)- 72 21.27 3
CNT30508581 Solanum lycopersicum 1:21842278-21843751 (-) noncoding (-0.004096)- 51 21.9 1Expressed preferentially in root
CNT30508580 Solanum lycopersicum 1:63497833-63501001 (+) noncoding (-0.012288)- 93 18.92 2Conserved counterparts: CNT3097484
Expressed preferentially in leaf
CNT30508579 Solanum lycopersicum 1:23860554-23860976 (+) noncoding (-0.0004096)- 55 162.47 1Expressed preferentially in root
CNT30508578 Solanum lycopersicum 1:96127546-96127813 (+) noncoding (-0.0004096)- - 837.08 1Expressed preferentially in fruit
CNT30508577 Solanum lycopersicum 1:75128708-75133840 (-) coding (0.027)- 62 5.05 2
CNT30508576 Solanum lycopersicum 1:92656406-92658202 (+) noncoding (-0.0208896)- 73 6.49 2Expressed preferentially in root
CNT30508575 Solanum lycopersicum 1:88313568-88327268 (-) noncoding (-0.233472)- 52 2.75 3Conserved counterparts: CNT3090003
Expressed preferentially in root
CNT30508574 Solanum lycopersicum 1:88313550-88327268 (-) noncoding (-0.233472)- 87 0.94 4Conserved counterparts: CNT3090003
Expressed preferentially in root
CNT30508573 Solanum lycopersicum 1:59906206-59907630 (-) noncoding (-0.0311296)- 59 7.73 2
CNT30508572 Solanum lycopersicum 1:6423095-6426125 (-) noncoding (-0.0004096)- 59 8.96 2Expressed preferentially in root
CNT30508571 Solanum lycopersicum 1:70809904-70811313 (-) noncoding (-0.0004096)- 81 7.7 3
CNT30508570 Solanum lycopersicum 1:27463988-27468120 (-) noncoding (-0.0417792)- 89 18.36 2
CNT30508569 Solanum lycopersicum 1:70619688-70622138 (-) noncoding (-0.0200704)- 60 15.61 1
CNT30508568 Solanum lycopersicum 1:97973656-97974350 (+) noncoding (-0.028672)- 56 67.1 1
CNT30508567 Solanum lycopersicum 1:61411026-61414338 (+) noncoding (-0.073728)- 32 12.71 2
CNT30508566 Solanum lycopersicum 1:76371610-76373067 (+) noncoding (-0.0090112)2e-40 (sp|Q8VY21|TLP3_ARATH) 53 15.36 2Expressed preferentially in root
CNT30508565 Solanum lycopersicum 1:72607509-72610177 (-) noncoding (-0.08192)- 55 5.18 2
CNT30508564 Solanum lycopersicum 1:88310719-88327268 (-) noncoding (-0.036864)- 89 0.4 5Conserved counterparts: CNT3090003
Expressed preferentially in root