CNCI status: | # |
Max. peptide length: | # |
Is conserved: | # |
Organ specific: | # |
Max. expression: | # |
No. of exons: | # |
Order by: | lncRNA ID |
Record details | CANTATAdb ID | Species | Location | CNCI status (score) | Swiss-Prot best hit | Max. peptide length | Max. expression | No. of exons | Additional notes |
---|---|---|---|---|---|---|---|---|---|
CNT30508669 | Solanum lycopersicum | 1:51606780-51613255 (-) | noncoding (-0.028672) | - | 99 | 2.65 | 2 | ||
CNT30508668 | Solanum lycopersicum | 1:53286030-53288022 (-) | noncoding (-0.090112) | - | 60 | 2594.31 | 2 | Conserved counterparts: CNT3090084, CNT3085930, CNT30426927 Expressed preferentially in root |
|
CNT30508666 | Solanum lycopersicum | 1:74908605-74910698 (-) | noncoding (-0.0004096) | - | 76 | 3.24 | 3 | ||
CNT30508665 | Solanum lycopersicum | 1:5166666-5167275 (-) | coding (0.197) | - | 86 | 3.41 | 2 | ||
CNT30508663 | Solanum lycopersicum | 1:9527987-9538902 (+) | noncoding (-0.0872448) | - | 53 | 6.74 | 3 | ||
CNT30508662 | Solanum lycopersicum | 1:1022135-1022674 (+) | noncoding (-0.0090112) | - | 68 | 1.99 | 3 | Conserved counterparts: CNT3090763 | |
CNT30508661 | Solanum lycopersicum | 1:14327086-14337751 (-) | noncoding (-0.036864) | - | 64 | 13.7 | 2 | ||
CNT30508660 | Solanum lycopersicum | 1:94630311-94630630 (+) | noncoding (-0.0897024) | - | 76 | 75.96 | 2 | ||
CNT30508659 | Solanum lycopersicum | 1:2689475-2694680 (-) | noncoding (-0.0004096) | - | - | 3.83 | 2 | ||
CNT30508658 | Solanum lycopersicum | 1:1567622-1572352 (-) | noncoding (-0.1024) | 8e-27 (sp|Q9LT79|PUB25_ARATH) | 50 | 55.21 | 3 | Conserved counterparts: CNT3090884 | |
CNT30508657 | Solanum lycopersicum | 1:96475655-96479397 (-) | noncoding (-0.0888832) | - | 56 | 314.09 | 2 | Expressed preferentially in fruit | |
CNT30508656 | Solanum lycopersicum | 1:439602-442085 (+) | noncoding (-0.606208) | - | 47 | 118.58 | 1 | Conserved counterparts: CNT3090449 Expressed preferentially in fruit |
|
CNT30508655 | Solanum lycopersicum | 1:96141048-96142688 (+) | noncoding (-0.135168) | 3e-67 (sp|Q67YI6|ATL65_ARATH) | 55 | 35.42 | 1 | ||
CNT30508654 | Solanum lycopersicum | 1:69710803-69711700 (-) | noncoding (-0.065536) | - | 78 | 1.18 | 1 | ||
CNT30508653 | Solanum lycopersicum | 1:98137116-98137897 (+) | noncoding (-0.0299008) | - | 42 | 2.94 | 2 | ||
CNT30508652 | Solanum lycopersicum | 1:70001595-70001898 (-) | noncoding (-0.012288) | - | 68 | 4.61 | 1 | Conserved counterparts: CNT3096554 | |
CNT30508651 | Solanum lycopersicum | 1:87418998-87421369 (-) | noncoding (-0.004096) | 6e-36 (sp|O04496|AED3_ARATH) | 35 | 417.52 | 2 | Conserved counterparts: CNT3098490 Expressed preferentially in fruit |
|
CNT30508650 | Solanum lycopersicum | 1:85613102-85614712 (-) | noncoding (-0.0004096) | - | 71 | 6.34 | 2 | ||
CNT30508649 | Solanum lycopersicum | 1:79400387-79401189 (-) | noncoding (-0.0004096) | - | 37 | 39.61 | 1 | ||
CNT30508648 | Solanum lycopersicum | 1:60463022-60465413 (+) | noncoding (-0.0004096) | - | 37 | 7.22 | 2 | ||
CNT30508647 | Solanum lycopersicum | 1:92457095-92471572 (+) | noncoding (-0.22528) | - | - | 392.42 | 2 | Conserved counterparts: CNT3094382 Expressed preferentially in fruit |
|
CNT30508646 | Solanum lycopersicum | 1:70085703-70086006 (-) | noncoding (-0.0135168) | - | 68 | 0.64 | 1 | ||
CNT30508645 | Solanum lycopersicum | 1:61592195-61594236 (-) | noncoding (-0.0131072) | - | 45 | 11.63 | 2 | ||
CNT30508644 | Solanum lycopersicum | 1:88310719-88327268 (-) | noncoding (-0.0434176) | - | 42 | 11.24 | 3 | Conserved counterparts: CNT3090452 Expressed preferentially in root |
|
CNT30508643 | Solanum lycopersicum | 1:81624400-81640286 (+) | noncoding (-0.0118784) | 2e-69 (sp|Q71T45|H32_EUPES) | 58 | 196.37 | 2 | Conserved counterparts: CNT3094453, CNT30709007 Expressed preferentially in fruit |
|
CNT30508642 | Solanum lycopersicum | 1:53402389-53405559 (-) | noncoding (-0.0004096) | - | 49 | 3.61 | 2 | ||
CNT30508641 | Solanum lycopersicum | 1:18053916-18063241 (+) | noncoding (-0.0004096) | - | 100 | 15.29 | 2 | ||
CNT30508640 | Solanum lycopersicum | 1:95736635-95739459 (-) | noncoding (-0.0049152) | 3e-51 (sp|Q9ZQ91|CXE7_ARATH) | 51 | 11.28 | 3 | Conserved counterparts: CNT3090114 Expressed preferentially in root |
|
CNT30508639 | Solanum lycopersicum | 1:69960836-69961139 (-) | noncoding (-0.0114688) | - | 68 | 0 | 1 | ||
CNT30508638 | Solanum lycopersicum | 1:83876233-83878201 (-) | noncoding (-0.0176128) | 8e-19 (sp|P0C2F6|RNHX1_ARATH) | 68 | 4.24 | 1 | Expressed preferentially in root | |
CNT30508637 | Solanum lycopersicum | 1:74773026-74773469 (-) | noncoding (-0.0004096) | - | 43 | 13.84 | 2 | ||
CNT30508636 | Solanum lycopersicum | 1:66483702-66484112 (+) | noncoding (-0.0004096) | 8e-38 (sp|Q3C1K7|RR18_NICSY) | - | 2492.89 | 1 | Expressed preferentially in root | |
CNT30508635 | Solanum lycopersicum | 1:64639774-64640033 (-) | noncoding (-0.0004096) | - | 39 | 5539.09 | 1 | Expressed preferentially in root | |
CNT30508634 | Solanum lycopersicum | 1:70148975-70149266 (-) | noncoding (-0.0004096) | - | 39 | 0 | 1 | ||
CNT30508633 | Solanum lycopersicum | 1:11697006-11697792 (+) | noncoding (-0.024576) | - | 72 | 4.23 | 2 | ||
CNT30508632 | Solanum lycopersicum | 1:1022139-1022690 (+) | noncoding (-0.0303104) | - | 80 | 22.23 | 2 | Conserved counterparts: CNT3090763 | |
CNT30508631 | Solanum lycopersicum | 1:19540044-19543160 (+) | noncoding (-0.069632) | - | 82 | 13.3 | 2 | ||
CNT30508630 | Solanum lycopersicum | 1:75128818-75132388 (-) | coding (0.027) | - | 72 | 46.23 | 2 | ||
CNT30508629 | Solanum lycopersicum | 1:73196388-73197054 (-) | noncoding (-0.0004096) | - | 73 | 154.38 | 1 | Expressed preferentially in root | |
CNT30508628 | Solanum lycopersicum | 1:88322296-88322526 (+) | noncoding (-0.0004096) | - | - | 11.33 | 1 | Conserved counterparts: CNT3090189 | |
CNT30508627 | Solanum lycopersicum | 1:88313568-88327268 (-) | noncoding (-0.233472) | - | 52 | 4.97 | 2 | Conserved counterparts: CNT3090003 Expressed preferentially in root |
|
CNT30508626 | Solanum lycopersicum | 1:74685623-74686055 (+) | noncoding (-0.0237568) | 6e-70 (sp|Q8S8T4|UXS4_ARATH) | 53 | 8.97 | 2 | Conserved counterparts: CNT3091042 | |
CNT30508625 | Solanum lycopersicum | 1:1929602-1931304 (-) | noncoding (-0.0012288) | - | 92 | 9.88 | 1 | Expressed preferentially in fruit | |
CNT30508624 | Solanum lycopersicum | 1:75128794-75130958 (-) | noncoding (-0.034816) | - | 72 | 1.61 | 2 | ||
CNT30508623 | Solanum lycopersicum | 1:78618450-78618652 (+) | noncoding (-0.0004096) | - | 35 | 24.3 | 1 | ||
CNT30508622 | Solanum lycopersicum | 1:29216679-29219042 (-) | noncoding (-0.016384) | - | 95 | 14.34 | 2 | Expressed preferentially in root | |
CNT30508620 | Solanum lycopersicum | 1:98387005-98400022 (+) | noncoding (-0.0004096) | - | - | 681.58 | 3 | Conserved counterparts: CNT30228314, CNT30533264, CNT30158138, CNT30486098, CNT30574688, CNT30691925, CNT30118325, CNT30709339, CNT3036345 Expressed preferentially in fruit |
|
CNT30508619 | Solanum lycopersicum | 1:70309937-70315185 (+) | noncoding (-0.008192) | - | 85 | 9.79 | 2 | ||
CNT30508618 | Solanum lycopersicum | 1:95732769-95733118 (-) | noncoding (-0.331776) | 2e-21 (sp|I4DST8|TCEA1_TULGE) | - | 6.7 | 2 | Conserved counterparts: CNT3090866 Expressed preferentially in root |
|
CNT30508617 | Solanum lycopersicum | 1:15175414-15183743 (+) | noncoding (-0.090112) | - | - | 7.59 | 2 |