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Found 8440 records

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Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3099159 Solanum tuberosum 00:12461551-12462513 (+) noncoding (-0.0004096)9e-51 (sp|Q9FWA3|6PGD2_ARATH) 38 0.75 2
CNT3099158 Solanum tuberosum 00:24097470-24107239 (-) noncoding (-0.0004096)9e-39 (sp|P0DO06|9DC2_SOLPI) 42 0.5 2
CNT3099157 Solanum tuberosum 00:39958679-39961396 (-) noncoding (-0.0004096)- 37 37.61 2
CNT3099156 Solanum tuberosum 00:42192628-42193537 (-) noncoding (-0.0004096)- 39 77.41 2
CNT3099155 Solanum tuberosum 00:42944025-42945073 (-) noncoding (-0.0004096)- 49 3.86 2
CNT3099154 Solanum tuberosum 00:22584473-22622678 (-) noncoding (-0.0004096)- 37 20.39 2Conserved counterparts:
CNT3099153 Solanum tuberosum 00:51202191-51202450 (-) noncoding (-0.0557056)- 79 99.78 1
CNT3099152 Solanum tuberosum 00:37739598-37741941 (+) noncoding (-0.04096)- 49 15.29 2
CNT3099150 Solanum tuberosum 00:32053274-32060945 (-) noncoding (-0.0004096)- 70 7.31 2
CNT3099148 Solanum tuberosum 00:30937900-30939687 (+) noncoding (-0.0004096)- 52 13.02 3
CNT3099147 Solanum tuberosum 00:40501354-40503699 (+) noncoding (-0.0004096)- 68 39.14 1
CNT3099146 Solanum tuberosum 00:30709915-30714585 (+) noncoding (-0.151552)- 94 4.09 2
CNT3099145 Solanum tuberosum 00:33514777-33515282 (-) noncoding (-0.0004096)- 93 13.79 2
CNT3099143 Solanum tuberosum 00:26737214-26798926 (+) noncoding (-0.114688)7e-18 (sp|Q9AYP9|LECC_PHYAM) 34 1.59 2Conserved counterparts:
CNT3099142 Solanum tuberosum 00:45260498-45261223 (-) noncoding (-0.0004096)- 32 2.91 2
CNT3099141 Solanum tuberosum 00:45720833-45721485 (+) noncoding (-0.057344)2e-26 (sp|Q7XA40|RGA3_SOLBU) 59 2.42 1
CNT3099140 Solanum tuberosum 00:39906985-39907816 (+) coding (0.205)- 94 0.79 2
CNT3099139 Solanum tuberosum 00:20114088-20247596 (+) noncoding (-0.0004096)- 45 998.04 3Conserved counterparts:
CNT3099136 Solanum tuberosum 00:18917754-18937155 (-) noncoding (-0.0004096)- 50 4.37 2
CNT3099135 Solanum tuberosum 00:5097593-5101327 (-) noncoding (-0.0147456)- 31 10.93 4
CNT3099134 Solanum tuberosum 00:19715191-19718588 (+) noncoding (-0.0004096)- 37 7.99 2
CNT3099133 Solanum tuberosum 00:21434290-21460748 (-) noncoding (-0.0004096)- - 663.7 2
CNT3099132 Solanum tuberosum 00:45189125-45189860 (+) noncoding (-0.18432)- 46 8.19 1
CNT3099131 Solanum tuberosum 00:5327700-5330511 (-) noncoding (-0.0004096)- 32 6 3
CNT3099130 Solanum tuberosum 00:36260839-36261329 (-) noncoding (-0.0004096)- - 52.23 1
CNT3099129 Solanum tuberosum 00:45037278-45037743 (-) noncoding (-0.0004096)- 44 77.23 2
CNT3099128 Solanum tuberosum 00:32343404-32354734 (-) noncoding (-0.0004096)3e-53 (sp|Q14T82|C76B9_PETHY) 32 8.37 2
CNT3099127 Solanum tuberosum 00:34521670-34522029 (-) noncoding (-0.0376832)- 93 5.99 2
CNT3099126 Solanum tuberosum 00:37765278-37766424 (-) noncoding (-0.0004096)3e-42 (sp|P93531|C71D7_SOLCH) 47 11.76 2
CNT3099125 Solanum tuberosum 00:17877649-17878287 (-) noncoding (-0.0004096)- 40 14.12 1
CNT3099122 Solanum tuberosum 00:30331613-30336051 (+) noncoding (-0.036864)1e-35 (sp|Q8VZG8|MIK2_ARATH) 93 11.74 2
CNT3099121 Solanum tuberosum 00:36799353-36799941 (-) noncoding (-0.0004096)- 45 15.65 1
CNT3099119 Solanum tuberosum 00:26169677-26195413 (+) coding (0.001)1e-48 (sp|C0LGP4|Y3475_ARATH) 60 1 4
CNT3099117 Solanum tuberosum 00:30402078-30405803 (-) noncoding (-0.024576)- 90 4.24 2
CNT3099116 Solanum tuberosum 00:31987839-31990940 (+) noncoding (-0.101581)- 63 0.73 2
CNT3099115 Solanum tuberosum 00:24105470-24105683 (+) noncoding (-0.0004096)- 71 13.18 1
CNT3099114 Solanum tuberosum 00:48861399-48861759 (-) noncoding (-0.0004096)0.00000003 (sp|A0A0N9HT29|C71BE_SINHE) 81 89.51 1
CNT3099112 Solanum tuberosum 00:12649122-12670089 (+) noncoding (-0.0004096)- - 0.87 3
CNT3099110 Solanum tuberosum 00:36010670-36013339 (+) noncoding (-0.0004096)- 35 14.8 2
CNT3099109 Solanum tuberosum 00:36194478-36197427 (+) noncoding (-0.1024)- 41 8.04 3
CNT3099108 Solanum tuberosum 00:39435074-39436006 (+) noncoding (-0.0180224)- 78 3.9 2
CNT3099107 Solanum tuberosum 00:48019571-48019993 (-) noncoding (-0.0004096)- 41 259.34 1
CNT3099106 Solanum tuberosum 00:7093577-7095021 (+) coding (0.116)- 81 4.72 1
CNT3099105 Solanum tuberosum 00:38852135-38856264 (-) noncoding (-0.0004096)- 70 15.93 2
CNT3099104 Solanum tuberosum 00:25232234-25242651 (+) noncoding (-0.0303104)- - 12.93 2Conserved counterparts:
CNT3099103 Solanum tuberosum 00:10802476-10802915 (+) noncoding (-0.086016)- 43 19.62 1
CNT3099102 Solanum tuberosum 00:37678840-37681036 (+) noncoding (-0.06144)- 76 33.34 1
CNT3099101 Solanum tuberosum 00:21452350-21460748 (-) noncoding (-0.028672)3e-93 (sp|P52404|CHI2_SOLTU) 44 1275.17 2
CNT3099100 Solanum tuberosum 00:30868959-30869405 (+) noncoding (-0.014336)- 82 9.44 2
CNT3099099 Solanum tuberosum 00:37444455-37447358 (+) noncoding (-0.018432)- 61 24.77 3