SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3089 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30171530 Trifolium pratense LG2:4479770-4487441 (+) noncoding (-0.0360448)- 99 2.38 3
CNT30171529 Trifolium pratense LG2:18812106-18821608 (+) noncoding (-0.0004096)1e-17 (sp|Q8L7A0|TAUE3_ARATH) 32 4.88 2
CNT30171528 Trifolium pratense LG2:31781679-31794736 (+) noncoding (-0.049152)1e-98 (sp|P51088|CHS6_TRISU) 51 10.43 2
CNT30171527 Trifolium pratense LG2:16464842-16465656 (+) noncoding (-0.090112)- 76 28.07 2
CNT30171526 Trifolium pratense LG2:23487760-23492622 (-) noncoding (-0.0299008)3e-83 (sp|Q40374|PR1_MEDTR) 68 12.56 2
CNT30171525 Trifolium pratense LG2:3764968-3773008 (-) noncoding (-0.0004096)- 34 3.05 2
CNT30171524 Trifolium pratense LG2:22045364-22046102 (-) noncoding (-0.0110592)1e-93 (sp|P93008|RH21_ARATH) 92 11.55 2
CNT30171522 Trifolium pratense LG2:11568476-11569657 (-) noncoding (-0.0004096)- 45 2.23 2
CNT30171521 Trifolium pratense LG2:31866275-31866903 (-) noncoding (-0.0147456)- 46 25.45 3
CNT30171520 Trifolium pratense LG2:5843917-5845441 (-) noncoding (-0.008192)7e-23 (sp|Q9ZT94|POLR2_ARATH) 41 4.76 2
CNT30171519 Trifolium pratense LG2:12865850-12866391 (-) noncoding (-0.069632)- 31 40.28 2
CNT30171518 Trifolium pratense LG2:17019936-17020168 (-) noncoding (-0.0004096)- - 40.79 1
CNT30171516 Trifolium pratense LG2:12511900-12514054 (-) noncoding (-0.126976)1e-18 (sp|Q9FVX1|GRXC3_ARATH) 64 87.35 3
CNT30171515 Trifolium pratense LG2:15174712-15176189 (-) noncoding (-0.08192)1e-63 (sp|P08770|TRA1_MAIZE) 49 11.06 1
CNT30171514 Trifolium pratense LG2:31364162-31374138 (-) noncoding (-0.0827392)2e-103 (sp|Q680C0|GDL62_ARATH) 61 0.47 3
CNT30171513 Trifolium pratense LG2:32279981-32289010 (-) noncoding (-0.0004096)2e-57 (sp|Q10PW9|MST4_ORYSJ) - 16.2 2
CNT30171512 Trifolium pratense LG2:21911393-21911970 (-) noncoding (-0.032768)- 89 174.07 2
CNT30171511 Trifolium pratense LG2:4320289-4323559 (-) NA (0)- 76 1.74 5
CNT30171510 Trifolium pratense LG2:26069260-26074883 (+) noncoding (-0.0012288)- 69 12.98 2
CNT30171509 Trifolium pratense LG2:30392485-30393387 (+) noncoding (-0.0004096)- 30 5.07 2
CNT30171508 Trifolium pratense LG2:26152434-26153615 (+) noncoding (-0.0004096)- 31 12.24 2
CNT30171507 Trifolium pratense LG2:14583369-14588053 (+) NA (0)- 73 6.74 2
CNT30171506 Trifolium pratense LG2:15887417-15888774 (-) noncoding (-0.0004096)- - 179.16 2
CNT30171505 Trifolium pratense LG2:14043117-14048022 (-) noncoding (-0.0004096)- - 3.18 2
CNT30171504 Trifolium pratense LG2:16613102-16614362 (-) noncoding (-0.02048)- 30 7.95 4
CNT30171503 Trifolium pratense LG2:3764968-3774269 (-) noncoding (-0.049152)2e-124 (sp|P0C7Q7|PPR38_ARATH) 40 1.41 2
CNT30171502 Trifolium pratense LG2:28963978-28966119 (-) noncoding (-0.0004096)- 41 6.94 4
CNT30171501 Trifolium pratense LG2:474785-475765 (+) noncoding (-0.069632)- 79 1.16 2
CNT30171500 Trifolium pratense LG2:145929-147111 (-) noncoding (-0.0004096)- 87 3.57 3
CNT30171499 Trifolium pratense LG2:13737665-13739414 (+) noncoding (-0.0004096)- 45 23.3 1
CNT30171498 Trifolium pratense LG2:10000241-10000720 (-) noncoding (-0.0036864)- 93 5.28 1
CNT30171497 Trifolium pratense LG2:22657976-22659961 (-) noncoding (-0.086016)9e-28 (sp|Q8RX56|UNC13_ARATH) 67 28.97 3
CNT30171496 Trifolium pratense LG2:104777-105419 (-) noncoding (-0.036864)- 61 23.21 2
CNT30171495 Trifolium pratense LG2:31680766-31692535 (-) noncoding (-0.0557056)4e-114 (sp|P51088|CHS6_TRISU) 67 2.17 3
CNT30171494 Trifolium pratense LG2:20988727-21003556 (+) coding (0.248)- 56 0 3
CNT30171493 Trifolium pratense LG2:27985495-27985769 (+) noncoding (-0.028672)- 45 145.79 2
CNT30171492 Trifolium pratense LG2:31958774-31959286 (+) noncoding (-0.0004096)- 48 1.44 2
CNT30171491 Trifolium pratense LG2:20779440-20779770 (-) noncoding (-0.0004096)- - 12.16 2
CNT30171490 Trifolium pratense LG2:4657582-4659654 (-) noncoding (-0.712704)- 46 7.98 3
CNT30171489 Trifolium pratense LG2:20760891-20761257 (-) noncoding (-0.06144)- 60 2.49 2
CNT30171488 Trifolium pratense LG2:7488240-7491073 (+) noncoding (-0.0004096)- 52 19.49 2
CNT30171487 Trifolium pratense LG2:12101848-12103295 (-) noncoding (-0.0360448)- 98 39.86 2
CNT30171486 Trifolium pratense LG2:32063372-32067571 (+) noncoding (-0.0004096)2e-56 (sp|B9FSC8|OPR11_ORYSJ) 30 0.5 2
CNT30171485 Trifolium pratense LG2:30021709-30022160 (+) noncoding (-0.036864)- 83 6.41 2
CNT30171484 Trifolium pratense LG2:14043037-14048678 (-) NA (0)- 35 1.98 3
CNT30171483 Trifolium pratense LG2:4244668-4257157 (+) noncoding (-0.0004096)- 50 10.61 3
CNT30171482 Trifolium pratense LG2:27123738-27125488 (-) noncoding (-0.0004096)3e-124 (sp|D4Q9Z4|SGT2_SOYBN) 71 12.97 2
CNT30171481 Trifolium pratense LG2:35635-36696 (+) noncoding (-0.0004096)- - 10.29 2
CNT30171480 Trifolium pratense LG2:3322410-3322902 (+) noncoding (-0.0004096)- - 9.86 1
CNT30171479 Trifolium pratense LG2:1368111-1378869 (+) noncoding (-0.032768)- 53 0 2