SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 2986 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Additional notes
CNT30575139 Oryza barthii 2:1848000-1849312 (+) noncoding (-0.0004096)- 31 4.14 2
CNT30575138 Oryza barthii 2:31307010-31307531 (+) noncoding (-0.0622592)- 58 67.06 2Conserved counterparts: CNT30519902, CNT30691603
CNT30575136 Oryza barthii 2:14290506-14293360 (-) coding (0.251)2e-54 (sp|Q10716|CYSP1_MAIZE) 70 2.93 2Conserved counterparts: CNT30603768, CNT30520175
CNT30575135 Oryza barthii 2:30364702-30365561 (+) noncoding (-0.0167936)0.00000001 (sp|Q67YI9|EPN2_ARATH) 86 1 2Conserved counterparts: CNT30116023, CNT30520016
CNT30575134 Oryza barthii 2:3055777-3056563 (+) noncoding (-0.069632)- - 157.12 2Conserved counterparts: CNT30229606, CNT30142141, CNT30461176, CNT30157648, CNT30595771, CNT30115854, CNT30603673, CNT30100520, CNT3074679, CNT30321313, CNT309808, CNT30690921, CNT30642981, CNT3019810, CNT30710242
CNT30575133 Oryza barthii 2:14806078-14807427 (+) coding (0.125)- 75 24.95 1
CNT30575131 Oryza barthii 2:26971920-26972879 (+) coding (0.049)- 83 62.23 2Conserved counterparts: CNT30691310
CNT30575130 Oryza barthii 2:12333720-12334006 (+) noncoding (-0.098304)- 82 6.65 1
CNT30575129 Oryza barthii 2:16655895-16656802 (-) noncoding (-0.0049152)- 58 97.12 2Conserved counterparts: CNT30512729, CNT30596064, CNT30116094, CNT30604019, CNT30100253, CNT3085191, CNT30561658, CNT3019597
CNT30575128 Oryza barthii 2:770809-771129 (+) noncoding (-0.0004096)- 32 230.97 1Conserved counterparts: CNT30519728
CNT30575127 Oryza barthii 2:26090792-26092121 (+) coding (0.325)8e-130 (sp|A3F5L3|DES2_SORBI) 65 9.64 2Conserved counterparts: CNT30139418, CNT30595697, CNT309611
CNT30575126 Oryza barthii 2:24301393-24301826 (-) noncoding (-0.008192)- 31 9.81 2
CNT30575124 Oryza barthii 2:22262534-22264934 (+) coding (0.206)- 31 15.56 2Conserved counterparts: CNT30100335, CNT30520029
CNT30575123 Oryza barthii 2:3113944-3114373 (-) noncoding (-0.188416)- 37 1 2
CNT30575122 Oryza barthii 2:27235050-27235564 (+) noncoding (-0.126976)- 55 16.61 2
CNT30575121 Oryza barthii 2:5694121-5695029 (-) noncoding (-0.045056)- 41 6.44 3Conserved counterparts: CNT30458968, CNT30100206
CNT30575118 Oryza barthii 2:1848000-1849481 (+) noncoding (-0.0004096)- 36 33.39 1
CNT30575117 Oryza barthii 2:9781823-9783671 (+) noncoding (-0.0610304)- 69 1.6 3Conserved counterparts: CNT30596942, CNT30117920, CNT30103529, CNT30697275
CNT30575116 Oryza barthii 2:31465772-31466824 (+) coding (0.103)- 96 0 2Conserved counterparts: CNT30595837
CNT30575115 Oryza barthii 2:6084835-6086979 (-) coding (0.012)- 51 2.55 3
CNT30575113 Oryza barthii 2:7179006-7182581 (-) noncoding (-0.024576)- 74 14.14 2
CNT30575112 Oryza barthii 2:12353281-12353760 (-) noncoding (-0.0004096)- 39 2.64 2
CNT30575111 Oryza barthii 2:3113944-3114373 (-) noncoding (-0.073728)- 39 0.19 1
CNT30575110 Oryza barthii 2:27834129-27835170 (-) noncoding (-0.04096)- 76 197.36 2Conserved counterparts: CNT30115967, CNT30603644
CNT30575109 Oryza barthii 2:2368024-2368576 (-) noncoding (-0.0200704)- 33 5.78 2
CNT30575108 Oryza barthii 2:19790799-19796927 (-) noncoding (-0.028672)- 75 3.1 4Conserved counterparts: CNT30142684, CNT30459997, CNT30595715, CNT30603681, CNT30100370, CNT30691495
CNT30575107 Oryza barthii 2:10662876-10663414 (+) noncoding (-0.094208)- 48 1.22 2Conserved counterparts: CNT30100095
CNT30575106 Oryza barthii 2:17864686-17865523 (-) coding (0.525)- 66 43.94 2
CNT30575105 Oryza barthii 2:16060356-16063282 (+) noncoding (-0.098304)- 57 5.83 2Conserved counterparts: CNT30100516
CNT30575104 Oryza barthii 2:3857419-3857767 (-) noncoding (-0.0004096)- 53 19.11 2
CNT30575103 Oryza barthii 2:20332813-20333221 (+) noncoding (-0.073728)- 64 5.44 2Conserved counterparts: CNT30100073
CNT30575102 Oryza barthii 2:4917359-4917666 (+) coding (0.353)- 35 30.71 1
CNT30575101 Oryza barthii 2:2991854-2993231 (-) noncoding (-0.06144)- 87 27.34 2Conserved counterparts: CNT30595669, CNT30603641
Expressed preferentially in leaf
CNT30575100 Oryza barthii 2:16643424-16644528 (+) noncoding (-0.0446464)- 80 520.29 1Conserved counterparts: CNT30100288
CNT30575099 Oryza barthii 2:1380465-1380873 (+) noncoding (-0.088064)- 42 6.98 2
CNT30575097 Oryza barthii 2:10653852-10654357 (-) noncoding (-0.0417792)- 37 8.07 2
CNT30575094 Oryza barthii 2:12431111-12433348 (+) noncoding (-0.032768)- 53 7.26 3
CNT30575093 Oryza barthii 2:2992814-2993314 (+) noncoding (-0.024576)- 88 1.58 1
CNT30575092 Oryza barthii 2:26971917-26972873 (+) coding (0.135)0.000000000002 (sp|P85087|GLNA_VITSX) 94 605.48 2Conserved counterparts: CNT30691310
CNT30575090 Oryza barthii 2:18695266-18695502 (+) noncoding (-0.0004096)- - 11.66 1
CNT30575089 Oryza barthii 2:23498682-23498980 (+) noncoding (-0.0004096)- 39 7.89 1Conserved counterparts: CNT30691330
CNT30575087 Oryza barthii 2:9652371-9654789 (+) noncoding (-0.264192)- 62 22.88 2Conserved counterparts: CNT30597242, CNT30692230
CNT30575085 Oryza barthii 2:11804578-11813615 (+) NA (0)- 67 5.68 4Conserved counterparts: CNT30115884, CNT30693334
CNT30575084 Oryza barthii 2:9781439-9783734 (+) NA (0)- 31 2.66 4Conserved counterparts: CNT30596942, CNT30117920, CNT30103529, CNT30697005
CNT30575083 Oryza barthii 2:23715970-23717148 (+) noncoding (-0.0540672)- 51 2.89 1
CNT30575082 Oryza barthii 2:10068816-10070861 (-) NA (0)- 54 2.35 2
CNT30575081 Oryza barthii 2:30776929-30777330 (-) noncoding (-0.0004096)- 66 35.79 1Conserved counterparts: CNT30100329
Expressed preferentially in leaf
CNT30575080 Oryza barthii 1:25529956-25530164 (-) noncoding (-0.135987)- 69 276.67 1
CNT30575079 Oryza barthii 1:12902517-12903674 (+) noncoding (-0.0249856)- 38 3.43 2Expressed preferentially in root
CNT30575078 Oryza barthii 1:13890609-13892461 (+) NA (0)- 56 8.69 2Conserved counterparts: CNT30597068, CNT30116518, CNT30101312