SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 5616 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Additional notes
CNT3025000 Populus trichocarpa 10:17236433-17236858 (-) coding (0.15)- 37 45.57 1
CNT3024999 Populus trichocarpa 10:16112610-16113030 (-) coding (0.207)- 45 0 2
CNT3024998 Populus trichocarpa 10:2301598-2356951 (-) coding (0.063)1e-137 (sp|O81832|Y4729_ARATH) 97 1.2 4
CNT3024996 Populus trichocarpa 10:12674720-12687341 (+) noncoding (-0.0004096)8e-55 (sp|Q6JN47|EIX1_SOLLC) 77 1.74 2
CNT3024995 Populus trichocarpa 10:3525812-3526771 (-) noncoding (-0.0004096)- 47 2.77 2Expressed preferentially in stem
CNT3024994 Populus trichocarpa 10:14581052-14581680 (+) noncoding (-0.06144)8e-30 (sp|Q9LI74|CHUP1_ARATH) 70 0.6 2
CNT3024993 Populus trichocarpa 10:10918806-10919273 (-) noncoding (-0.045056)3e-47 (sp|Q9LUI1|LRX6_ARATH) 70 0.58 3
CNT3024992 Populus trichocarpa 10:8955081-8963912 (+) noncoding (-0.0339968)3e-16 (sp|P32110|GSTX6_SOYBN) 48 536.3 2Expressed preferentially in root
CNT3024991 Populus trichocarpa 10:1916123-1916591 (-) noncoding (-0.0421888)- 50 6.17 2
CNT3024990 Populus trichocarpa 10:9305062-9305294 (+) noncoding (-0.0004096)- - 39.31 1
CNT3024989 Populus trichocarpa 10:8505374-8506197 (-) noncoding (-0.0667648)- 66 14.25 1
CNT3024988 Populus trichocarpa 10:20002687-20003595 (+) noncoding (-0.0004096)- 39 9.38 2
CNT3024987 Populus trichocarpa 10:2301446-2343983 (-) noncoding (-0.0397312)7e-80 (sp|O81832|Y4729_ARATH) 73 9.69 2
CNT3024986 Populus trichocarpa 10:13676403-13676670 (-) noncoding (-0.0004096)- 50 34.35 1
CNT3024985 Populus trichocarpa 10:18112658-18114304 (-) noncoding (-0.0557056)0.0000001 (sp|Q9SIQ7|CDPKO_ARATH) 50 43.78 4
CNT3024984 Populus trichocarpa 10:6406312-6406796 (-) noncoding (-0.0004096)- 31 35.57 1
CNT3024983 Populus trichocarpa 10:4093502-4094425 (-) noncoding (-0.0004096)- 55 43.91 1
CNT3024982 Populus trichocarpa 10:3883770-3884000 (-) noncoding (-0.0004096)- 67 123.97 1
CNT3024981 Populus trichocarpa 10:15205176-15206405 (+) noncoding (-0.0331776)0.000000001 (sp|H2DH17|C7A22_PANGI) 32 1.49 2
CNT3024980 Populus trichocarpa 10:16664520-16665132 (+) noncoding (-0.139264)6e-17 (sp|Q9XI93|NDRP2_ARATH) 72 151.72 2
CNT3024979 Populus trichocarpa 10:9244507-9245234 (-) noncoding (-0.0004096)- - 16.08 1
CNT3024978 Populus trichocarpa 10:20817730-20825093 (-) noncoding (-0.192512)3e-167 (sp|P45731|PAL1_POPKI) 82 102.58 2Expressed preferentially in stem
CNT3024977 Populus trichocarpa 10:2873440-2886299 (-) noncoding (-0.0360448)- 72 0.79 3
CNT3024976 Populus trichocarpa 10:20815439-20822753 (-) noncoding (-0.126976)1e-56 (sp|Q43052|PAL2_POPKI) 93 80.22 2Expressed preferentially in stem
CNT3024975 Populus trichocarpa 10:17374157-17383862 (-) noncoding (-0.086016)- - 12.74 2
CNT3024974 Populus trichocarpa 10:16377641-16379083 (+) noncoding (-0.0004096)- 58 3.37 3
CNT3024973 Populus trichocarpa 10:16118317-16131221 (-) noncoding (-0.147456)6e-28 (sp|Q5W274|PDR3_TOBAC) 73 35.46 2Expressed preferentially in root
CNT3024972 Populus trichocarpa 10:17373554-17383828 (-) coding (0.08)2e-63 (sp|Q9SAJ7|MTP9_ARATH) 74 2.46 2
CNT3024971 Populus trichocarpa 10:18606389-18607178 (-) noncoding (-0.004096)- 93 2.82 2
CNT3024970 Populus trichocarpa 10:3452759-3453612 (-) noncoding (-0.0032768)- 96 6.54 2Expressed preferentially in stem
CNT3024969 Populus trichocarpa 10:10493945-10503547 (-) noncoding (-0.073728)- 42 18.19 2Expressed preferentially in root
CNT3024968 Populus trichocarpa 10:20815441-20823071 (-) noncoding (-0.0131072)2e-49 (sp|Q50EX7|PAL1_PETHY) 92 1.47 2Expressed preferentially in stem
CNT3024967 Populus trichocarpa 10:17975374-17976200 (-) noncoding (-0.057344)- 69 6.27 1
CNT3024965 Populus trichocarpa 10:15787520-15787776 (-) noncoding (-0.0004096)- 75 119.36 1
CNT3024964 Populus trichocarpa 10:13403405-13403901 (-) noncoding (-0.14336)- 44 10.35 2
CNT3024963 Populus trichocarpa 10:21221504-21222116 (-) noncoding (-0.0004096)- 56 8.53 2
CNT3024962 Populus trichocarpa 10:17921294-17921906 (-) noncoding (-0.012288)- 51 20.4 1
CNT3024961 Populus trichocarpa 10:8821054-8869684 (+) coding (0.105)6e-63 (sp|O80763|NRX1_ARATH) 76 13.43 2
CNT3024960 Populus trichocarpa 10:8952542-8960251 (+) noncoding (-0.135168)- 51 10.01 2Expressed preferentially in root
CNT3024959 Populus trichocarpa 10:14393662-14393956 (+) noncoding (-0.0004096)- - 20.22 1
CNT3024958 Populus trichocarpa 10:12720923-12721518 (+) noncoding (-0.0012288)0.000000000000006 (sp|Q9M2C4|ACCH8_ARATH) 57 9.53 2
CNT3024957 Populus trichocarpa 10:2494974-2522176 (+) noncoding (-0.0004096)2e-20 (sp|O81833|SD11_ARATH) 49 0.28 3
CNT3024956 Populus trichocarpa 10:6910275-6910825 (+) noncoding (-0.0004096)- 71 15.36 1
CNT3024955 Populus trichocarpa 10:17243691-17245439 (-) noncoding (-0.0004096)- 30 65.42 2
CNT3024954 Populus trichocarpa 10:4922911-4928984 (-) noncoding (-0.0004096)- - 44.18 2
CNT3024953 Populus trichocarpa 10:9340887-9341108 (-) noncoding (-0.0004096)- 41 106.43 1
CNT3024952 Populus trichocarpa 10:14502645-14504322 (+) noncoding (-0.147456)- 63 0.44 1
CNT3024951 Populus trichocarpa 10:10080154-10081415 (+) noncoding (-0.0004096)- 71 9.51 2
CNT3024950 Populus trichocarpa 10:320652-320894 (+) noncoding (-0.024576)- 37 0 2
CNT3024949 Populus trichocarpa 10:6091741-6092197 (-) noncoding (-0.063488)- 66 0 2