SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 8440 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3099216 Solanum tuberosum 00:1583138-1583642 (+) noncoding (-0.008192)- 40 1.89 2
CNT3099215 Solanum tuberosum 00:26170031-26195413 (+) noncoding (-0.0004096)2e-47 (sp|C0LGP4|Y3475_ARATH) 37 3.38 3
CNT3099214 Solanum tuberosum 00:33830265-33834499 (+) noncoding (-0.0077824)4e-62 (sp|D7SFH9|LRL26_ARATH) - 2.71 2
CNT3099213 Solanum tuberosum 00:24105146-24125615 (-) noncoding (-0.0135168)1e-30 (sp|Q8VZG8|MIK2_ARATH) 65 4.09 2
CNT3099212 Solanum tuberosum 00:37859443-37860636 (-) coding (0.27)- 63 0.61 2
CNT3099211 Solanum tuberosum 00:17430802-17457404 (-) noncoding (-0.0004096)- 35 166.58 2
CNT3099208 Solanum tuberosum 00:20108241-20116163 (+) coding (0.371)- 82 47.94 2Conserved counterparts:
CNT3099207 Solanum tuberosum 00:31802703-31836610 (+) noncoding (-0.0004096)- 30 32.39 6
CNT3099206 Solanum tuberosum 00:14564837-14565661 (-) noncoding (-0.0004096)- 43 9.49 1
CNT3099205 Solanum tuberosum 00:13565001-13565728 (+) noncoding (-0.0004096)- 49 8.87 1
CNT3099204 Solanum tuberosum 00:19097732-19098189 (-) noncoding (-0.159744)- - 7.25 2
CNT3099203 Solanum tuberosum 00:13151055-13156415 (-) noncoding (-0.036864)- 63 2.15 8
CNT3099202 Solanum tuberosum 00:42961466-42962553 (+) noncoding (-0.0004096)- 99 13.06 2
CNT3099201 Solanum tuberosum 00:35450257-35464495 (-) noncoding (-0.0004096)- - 28.64 4
CNT3099200 Solanum tuberosum 00:15267131-15310922 (+) noncoding (-0.0638976)- 59 2.12 2
CNT3099199 Solanum tuberosum 00:22562861-22563162 (+) noncoding (-0.0004096)- - 16 1
CNT3099198 Solanum tuberosum 00:25190545-25241569 (+) noncoding (-0.0536576)- 62 1282.09 2Conserved counterparts:
CNT3099197 Solanum tuberosum 00:20858252-20952434 (-) noncoding (-0.0909312)- 49 37.88 2
CNT3099196 Solanum tuberosum 00:24873333-24934295 (-) noncoding (-0.0098304)1e-143 (sp|Q5MR23|9DC3_SOLPI) 82 9.03 3
CNT3099193 Solanum tuberosum 00:31686006-31687906 (+) noncoding (-0.0004096)- 53 103.91 3
CNT3099192 Solanum tuberosum 00:43232329-43232976 (+) noncoding (-0.0004096)- 43 2.65 2
CNT3099190 Solanum tuberosum 00:23078374-23088737 (-) noncoding (-0.0004096)2e-155 (sp|Q01412|E13A_SOLLC) 46 3.39 3
CNT3099189 Solanum tuberosum 00:40610974-40611497 (-) noncoding (-0.0004096)- 85 25.96 3
CNT3099188 Solanum tuberosum 00:38406484-38409475 (-) noncoding (-0.0004096)- 64 16.01 2
CNT3099186 Solanum tuberosum 00:32723490-32724432 (-) noncoding (-0.0004096)- 44 25.02 2
CNT3099185 Solanum tuberosum 00:25516459-25516900 (+) noncoding (-0.0483328)- 46 4.46 2
CNT3099184 Solanum tuberosum 00:40850032-40851349 (+) noncoding (-0.0004096)- 33 17.7 2
CNT3099183 Solanum tuberosum 00:40722263-40723038 (-) noncoding (-0.057344)- 64 14.82 2
CNT3099182 Solanum tuberosum 00:550240-558564 (-) noncoding (-0.223232)- 61 23.57 2
CNT3099181 Solanum tuberosum 00:40493230-40494608 (-) noncoding (-0.073728)- 64 26.12 2
CNT3099179 Solanum tuberosum 00:38677291-38689800 (+) noncoding (-0.0253952)- - 4.26 3
CNT3099178 Solanum tuberosum 00:12466821-12469987 (-) noncoding (-0.159744)- 52 42.13 2
CNT3099177 Solanum tuberosum 00:26170031-26208400 (+) noncoding (-0.032768)3e-67 (sp|C0LGP4|Y3475_ARATH) 71 0.28 4
CNT3099176 Solanum tuberosum 00:30887085-30887980 (-) noncoding (-0.0233472)- 44 3.56 1
CNT3099175 Solanum tuberosum 00:46651003-46651445 (+) noncoding (-0.0004096)- 52 10.21 2
CNT3099174 Solanum tuberosum 00:41101741-41103605 (-) noncoding (-0.036864)- 52 39.82 1
CNT3099173 Solanum tuberosum 00:23197360-23201208 (-) noncoding (-0.098304)- 56 15.73 2
CNT3099172 Solanum tuberosum 00:32071024-32071333 (-) noncoding (-0.0004096)- - 19.52 1
CNT3099171 Solanum tuberosum 00:26170683-26208748 (+) noncoding (-0.0004096)3e-67 (sp|Q9SD62|Y3471_ARATH) 62 1.12 2
CNT3099170 Solanum tuberosum 00:24886408-24890581 (+) noncoding (-0.0004096)1e-36 (sp|O49879|CF0_SOLLC) - 51.24 2
CNT3099169 Solanum tuberosum 00:8863089-8863302 (+) noncoding (-0.0004096)- - 16.44 1
CNT3099168 Solanum tuberosum 00:51668731-51668976 (-) noncoding (-0.045056)- 38 55.68 1
CNT3099167 Solanum tuberosum 00:20899523-20959945 (-) noncoding (-0.0004096)6e-95 (sp|Q40392|TMVRN_NICGU) 70 0.58 2
CNT3099166 Solanum tuberosum 00:36433877-36443126 (+) noncoding (-0.0004096)- 55 5.01 5
CNT3099165 Solanum tuberosum 00:37739598-37741607 (+) coding (0.089)- 49 0.69 2
CNT3099164 Solanum tuberosum 00:47853870-47854307 (-) noncoding (-0.0004096)- 40 9.1 2
CNT3099163 Solanum tuberosum 00:23083131-23088737 (-) noncoding (-0.0004096)4e-176 (sp|Q01412|E13A_SOLLC) 46 9.42 2
CNT3099162 Solanum tuberosum 00:5304322-5348596 (+) noncoding (-0.0004096)- - 1.66 2Conserved counterparts:
CNT3099161 Solanum tuberosum 00:35450000-35464753 (-) noncoding (-0.0004096)- 57 38.41 5
CNT3099160 Solanum tuberosum 00:17324131-17330105 (+) noncoding (-0.0004096)- - 35.79 3