CNCI status: | # |
Max. peptide length: | # |
Is conserved: | # |
Organ specific: | # |
Max. expression: | # |
No. of exons: | # |
Order by: | lncRNA ID |
Record details | CANTATAdb ID | Species | Location | CNCI status (score) | Swiss-Prot best hit | Max. peptide length | Max. expression | No. of exons | Additional notes |
---|---|---|---|---|---|---|---|---|---|
CNT3096767 | Solanum tuberosum | 10:57855098-57857101 (-) | noncoding (-0.006144) | - | 49 | 46.1 | 2 | Expressed preferentially in seed | |
CNT3096766 | Solanum tuberosum | 10:1500879-1501781 (+) | noncoding (-0.004096) | - | 66 | 4.73 | 2 | Expressed preferentially in seed | |
CNT3096765 | Solanum tuberosum | 10:59016887-59043026 (-) | noncoding (-0.053248) | - | - | 14.87 | 2 | ||
CNT3096764 | Solanum tuberosum | 10:17619198-17622406 (+) | noncoding (-0.032768) | - | 68 | 9.63 | 5 | ||
CNT3096763 | Solanum tuberosum | 10:5430099-5432779 (+) | noncoding (-0.0790528) | - | 74 | 8.29 | 1 | ||
CNT3096762 | Solanum tuberosum | 10:54982845-54983107 (+) | noncoding (-0.0004096) | - | 41 | 219.7 | 1 | Expressed preferentially in seed | |
CNT3096761 | Solanum tuberosum | 10:53517240-53612647 (-) | noncoding (-0.0110592) | 6e-17 (sp|Q7XBQ9|RGA2_SOLBU) | 61 | 0.65 | 3 | ||
CNT3096760 | Solanum tuberosum | 10:36061931-36066123 (-) | noncoding (-0.073728) | - | 97 | 13.2 | 4 | Expressed preferentially in seed | |
CNT3096759 | Solanum tuberosum | 10:1260414-1263799 (+) | noncoding (-0.086016) | - | 72 | 22.84 | 2 | Conserved counterparts: CNT30511182 | |
CNT3096758 | Solanum tuberosum | 10:4254295-4256306 (-) | noncoding (-0.0004096) | - | 38 | 19.84 | 2 | ||
CNT3096757 | Solanum tuberosum | 10:55076453-55082292 (-) | noncoding (-0.0004096) | - | - | 8.1 | 3 | ||
CNT3096756 | Solanum tuberosum | 10:49661662-49679310 (-) | noncoding (-0.120013) | - | 62 | 1.45 | 2 | Expressed preferentially in seed | |
CNT3096755 | Solanum tuberosum | 10:20682525-20684417 (-) | noncoding (-0.0004096) | - | 48 | 37.62 | 3 | Expressed preferentially in seed | |
CNT3096754 | Solanum tuberosum | 10:46081130-46084782 (-) | noncoding (-0.0004096) | - | 71 | 41.09 | 3 | ||
CNT3096753 | Solanum tuberosum | 10:54964513-54966251 (-) | noncoding (-0.0110592) | 0 (sp|P69322|UBIQP_PEA) | 58 | 0.23 | 3 | Conserved counterparts: CNT30512879, CNT30476145, CNT30726149, CNT30160455, CNT3086267, CNT30111644, CNT30511508, CNT30145540, CNT30120507, CNT30709517, CNT30419069 Expressed preferentially in seed |
|
CNT3096752 | Solanum tuberosum | 10:51868238-51879815 (-) | noncoding (-0.016384) | 2e-69 (sp|Q9XG54|OPR1_SOLLC) | 50 | 2.91 | 2 | ||
CNT3096751 | Solanum tuberosum | 10:42506825-42509558 (+) | noncoding (-0.012288) | - | 75 | 3.76 | 1 | ||
CNT3096750 | Solanum tuberosum | 10:54538700-54582440 (+) | noncoding (-0.0004096) | 1e-79 (sp|A6YIH8|C7D55_HYOMU) | 82 | 2.84 | 3 | ||
CNT3096749 | Solanum tuberosum | 10:6335776-6336548 (+) | noncoding (-0.002048) | - | 65 | 38.98 | 2 | ||
CNT3096748 | Solanum tuberosum | 10:51880155-51903411 (-) | coding (0.077) | 1e-173 (sp|Q9XG54|OPR1_SOLLC) | 54 | 3.95 | 3 | ||
CNT3096747 | Solanum tuberosum | 10:55452427-55476299 (-) | coding (0.096) | 4e-87 (sp|P37122|C76A2_SOLME) | 36 | 0.96 | 2 | Expressed preferentially in seed | |
CNT3096746 | Solanum tuberosum | 10:37823661-37826887 (-) | noncoding (-0.126976) | - | - | 25.91 | 3 | ||
CNT3096745 | Solanum tuberosum | 10:54964386-54966271 (-) | noncoding (-0.0110592) | 0 (sp|P0CG85|UBI1P_NICSY) | 60 | 52.69 | 3 | Conserved counterparts: CNT30512897, CNT30476145, CNT30726149, CNT30160455, CNT3086353, CNT30111644, CNT30511543, CNT30145540, CNT30120507, CNT30709517, CNT30418420 Expressed preferentially in seed |
|
CNT3096744 | Solanum tuberosum | 10:7785337-7785925 (+) | noncoding (-0.0028672) | 0.000000000000003 (sp|Q944N1|LHP1_SOLLC) | - | 2.72 | 2 | ||
CNT3096743 | Solanum tuberosum | 10:44771338-44771683 (-) | noncoding (-0.536576) | - | 53 | 0.54 | 1 | ||
CNT3096742 | Solanum tuberosum | 10:54964505-54966271 (-) | noncoding (-0.0110592) | 0 (sp|P69322|UBIQP_PEA) | 60 | 0 | 3 | Conserved counterparts: CNT30512879, CNT30476145, CNT30726149, CNT30160455, CNT3086267, CNT30111644, CNT30511543, CNT30145540, CNT30120507, CNT30709517, CNT30419069 Expressed preferentially in seed |
|
CNT3096741 | Solanum tuberosum | 10:10055313-10056000 (+) | noncoding (-0.114688) | - | 82 | 0 | 3 | ||
CNT3096739 | Solanum tuberosum | 10:1380721-1390201 (+) | noncoding (-0.004096) | 6e-153 (sp|Q1EC66|UBQ3_ARATH) | 45 | 1.39 | 3 | Conserved counterparts: CNT30264722, CNT30138349, CNT30488054, CNT30604126, CNT30511215, CNT30145248, CNT30376854, CNT30423866, CNT30214147 Expressed preferentially in seed |
|
CNT3096738 | Solanum tuberosum | 10:47286134-47362094 (-) | noncoding (-0.0004096) | 2e-24 (sp|Q9FHW7|SKP1B_ARATH) | 50 | 721.62 | 3 | ||
CNT3096737 | Solanum tuberosum | 10:54690105-54691468 (-) | noncoding (-0.036864) | - | 80 | 7.13 | 1 | ||
CNT3096735 | Solanum tuberosum | 10:57921714-57931581 (+) | noncoding (-0.0393216) | - | 78 | 15.65 | 5 | Expressed preferentially in seed | |
CNT3096734 | Solanum tuberosum | 10:52876061-52876529 (+) | noncoding (-0.0004096) | - | - | 6.97 | 1 | Expressed preferentially in seed | |
CNT3096733 | Solanum tuberosum | 10:52468387-52468696 (-) | noncoding (-0.0004096) | - | 31 | 22.57 | 2 | Expressed preferentially in seed | |
CNT3096732 | Solanum tuberosum | 10:2321357-2325276 (+) | noncoding (-0.04096) | - | 61 | 6.55 | 6 | Expressed preferentially in seed | |
CNT3096731 | Solanum tuberosum | 10:47904488-47904868 (-) | noncoding (-0.0004096) | - | 38 | 2.02 | 1 | ||
CNT3096730 | Solanum tuberosum | 10:58831186-58832446 (-) | noncoding (-0.16384) | - | 33 | 5.55 | 2 | ||
CNT3096729 | Solanum tuberosum | 10:39482547-39484467 (-) | noncoding (-0.024576) | - | 48 | 10 | 2 | Expressed preferentially in seed | |
CNT3096728 | Solanum tuberosum | 10:19895470-19900904 (-) | noncoding (-0.126976) | - | 74 | 118.06 | 2 | ||
CNT3096727 | Solanum tuberosum | 10:5901826-5906860 (+) | noncoding (-0.036864) | - | 54 | 9.79 | 6 | ||
CNT3096726 | Solanum tuberosum | 10:56460055-56460291 (+) | noncoding (-0.0561152) | - | 30 | 48.9 | 1 | Conserved counterparts: CNT30534084, CNT30118300 | |
CNT3096725 | Solanum tuberosum | 10:40657582-40662908 (+) | noncoding (-0.086016) | - | 81 | 21.05 | 2 | ||
CNT3096724 | Solanum tuberosum | 10:46502346-46503517 (+) | noncoding (-0.0004096) | - | 31 | 2.33 | 3 | Expressed preferentially in seed | |
CNT3096723 | Solanum tuberosum | 10:57909977-57933787 (-) | noncoding (-0.077824) | - | 64 | 25.3 | 3 | Expressed preferentially in seed | |
CNT3096722 | Solanum tuberosum | 10:55970686-55971871 (-) | coding (0.139) | - | 63 | 20.5 | 2 | ||
CNT3096721 | Solanum tuberosum | 10:47625494-47639246 (+) | noncoding (-0.0028672) | - | 69 | 48.51 | 2 | ||
CNT3096717 | Solanum tuberosum | 10:782182-783236 (-) | noncoding (-0.0004096) | - | 67 | 30.14 | 3 | ||
CNT3096716 | Solanum tuberosum | 10:47625587-47639108 (+) | noncoding (-0.086016) | - | 52 | 4.58 | 2 | ||
CNT3096713 | Solanum tuberosum | 10:8236586-8239424 (+) | noncoding (-0.0004096) | - | 45 | 4.63 | 2 | ||
CNT3096712 | Solanum tuberosum | 10:57467198-57467611 (-) | noncoding (-0.136806) | 2e-21 (sp|Q9M2V1|NCA1_ARATH) | 31 | 5.01 | 2 | ||
CNT3096710 | Solanum tuberosum | 10:56964369-56965761 (+) | noncoding (-0.0360448) | - | 54 | 8.11 | 2 | Expressed preferentially in seed |