CNCI status: | # |
Max. peptide length: | # |
Is conserved: | # |
Organ specific: | # |
Max. expression: | # |
No. of exons: | # |
Order by: | lncRNA ID |
Record details | CANTATAdb ID | Species | Location | CNCI status (score) | Swiss-Prot best hit | Max. peptide length | Max. expression | No. of exons | Additional notes |
---|---|---|---|---|---|---|---|---|---|
CNT30509399 | Solanum lycopersicum | 4:58089721-58090860 (-) | noncoding (-0.02048) | - | 62 | 581.67 | 3 | Conserved counterparts: CNT3092879 Expressed preferentially in root |
|
CNT30509398 | Solanum lycopersicum | 4:54325510-54326294 (+) | noncoding (-0.0004096) | - | 41 | 28.27 | 1 | Expressed preferentially in leaf | |
CNT30509397 | Solanum lycopersicum | 4:54442237-54443206 (+) | noncoding (-0.0004096) | - | - | 7.12 | 2 | ||
CNT30509396 | Solanum lycopersicum | 4:54327515-54371056 (-) | noncoding (-0.0004096) | - | 42 | 66.21 | 2 | Expressed preferentially in fruit | |
CNT30509395 | Solanum lycopersicum | 4:58274217-58280101 (+) | coding (0.045) | - | - | 6.51 | 3 | Expressed preferentially in leaf | |
CNT30509394 | Solanum lycopersicum | 4:20951915-20953472 (-) | noncoding (-0.0004096) | - | 61 | 5.14 | 2 | ||
CNT30509393 | Solanum lycopersicum | 4:2512074-2527785 (+) | noncoding (-0.0004096) | 3e-17 (sp|P0C897|Y3264_ARATH) | 51 | 4.6 | 2 | Conserved counterparts: CNT3093367 | |
CNT30509392 | Solanum lycopersicum | 4:24160578-24166263 (+) | noncoding (-0.0004096) | 0.00001 (sp|Q9SG02|RDR6_ARATH) | 53 | 8.37 | 1 | ||
CNT30509391 | Solanum lycopersicum | 4:41130838-41134492 (+) | noncoding (-0.032768) | - | 52 | 6.21 | 2 | ||
CNT30509390 | Solanum lycopersicum | 4:61406091-61406883 (-) | noncoding (-0.0004096) | - | - | 12.38 | 2 | Conserved counterparts: CNT3092772 | |
CNT30509389 | Solanum lycopersicum | 4:3877203-3881406 (+) | noncoding (-0.0004096) | 0.000000000000003 (sp|C7J4U3|OST4A_ORYSJ) | 45 | 28.38 | 2 | Conserved counterparts: CNT30261656, CNT30533280, CNT3082234, CNT30572643 | |
CNT30509388 | Solanum lycopersicum | 4:47495695-47497529 (-) | noncoding (-0.0004096) | - | 48 | 12.39 | 2 | Conserved counterparts: CNT30645856 Expressed preferentially in root |
|
CNT30509387 | Solanum lycopersicum | 4:58904432-58905205 (-) | noncoding (-0.0004096) | - | 34 | 5.67 | 2 | ||
CNT30509385 | Solanum lycopersicum | 4:48191310-48192102 (-) | noncoding (-0.1024) | - | 40 | 9.26 | 1 | ||
CNT30509384 | Solanum lycopersicum | 4:59810971-59811931 (-) | noncoding (-0.0004096) | - | 37 | 16.97 | 2 | ||
CNT30509383 | Solanum lycopersicum | 4:1754145-1757293 (-) | noncoding (-0.0315392) | - | 65 | 18.31 | 3 | Expressed preferentially in fruit | |
CNT30509382 | Solanum lycopersicum | 4:2599746-2600734 (-) | noncoding (-0.0086016) | 5e-43 (sp|P09043|G3PA_TOBAC) | 80 | 1163.67 | 2 | Conserved counterparts: CNT30490066 | |
CNT30509380 | Solanum lycopersicum | 4:24197155-24201474 (-) | coding (0.114) | - | 98 | 10.31 | 2 | ||
CNT30509379 | Solanum lycopersicum | 4:2996258-2997473 (-) | noncoding (-0.0241664) | - | 85 | 57.34 | 2 | ||
CNT30509378 | Solanum lycopersicum | 4:60899389-60899697 (-) | noncoding (-0.016384) | - | 32 | 1265.09 | 1 | Conserved counterparts: CNT3092889 | |
CNT30509377 | Solanum lycopersicum | 4:21197413-21198400 (-) | noncoding (-0.0004096) | - | 41 | 27.73 | 2 | ||
CNT30509376 | Solanum lycopersicum | 4:7900474-7903814 (+) | coding (0.089) | 0.00000004 (sp|P0C2F6|RNHX1_ARATH) | 94 | 3.66 | 1 | ||
CNT30509375 | Solanum lycopersicum | 4:55057363-55058389 (+) | noncoding (-0.0004096) | - | 54 | 282.02 | 2 | ||
CNT30509374 | Solanum lycopersicum | 4:41197414-41198146 (-) | noncoding (-0.0004096) | - | - | 817.93 | 2 | Conserved counterparts: CNT3077213, CNT3017337, CNT30695659 Expressed preferentially in root |
|
CNT30509373 | Solanum lycopersicum | 4:42066741-42068084 (+) | noncoding (-0.0004096) | - | 58 | 3.54 | 2 | ||
CNT30509372 | Solanum lycopersicum | 4:39859728-39860019 (+) | noncoding (-0.0004096) | - | 55 | 3.66 | 1 | ||
CNT30509371 | Solanum lycopersicum | 4:52891084-52892730 (-) | noncoding (-0.217088) | - | 52 | 6.41 | 1 | ||
CNT30509370 | Solanum lycopersicum | 4:21924581-21926288 (-) | noncoding (-0.02048) | - | 65 | 6.41 | 2 | ||
CNT30509369 | Solanum lycopersicum | 4:66153721-66155300 (+) | noncoding (-0.12288) | - | 70 | 8.42 | 2 | Conserved counterparts: CNT3093212 | |
CNT30509368 | Solanum lycopersicum | 4:60517699-60521236 (+) | noncoding (-0.0004096) | 8e-89 (sp|O82161|PHI1_TOBAC) | 74 | 97.94 | 2 | Conserved counterparts: CNT3092984 Expressed preferentially in root |
|
CNT30509367 | Solanum lycopersicum | 4:1896306-1896961 (-) | noncoding (-0.118784) | 4e-39 (sp|Q8LDS2|XTH27_ARATH) | 38 | 3.05 | 3 | ||
CNT30509365 | Solanum lycopersicum | 4:17080271-17095807 (-) | noncoding (-0.0004096) | - | 52 | 34.27 | 2 | ||
CNT30509364 | Solanum lycopersicum | 4:24210860-24215671 (+) | noncoding (-0.008192) | - | 98 | 20.98 | 2 | Expressed preferentially in leaf | |
CNT30509363 | Solanum lycopersicum | 4:64954716-64954958 (-) | noncoding (-0.0004096) | - | 60 | 34.89 | 1 | Expressed preferentially in fruit | |
CNT30509362 | Solanum lycopersicum | 4:37229609-37231607 (+) | noncoding (-0.0004096) | - | 98 | 10.64 | 2 | ||
CNT30509361 | Solanum lycopersicum | 4:59024202-59026276 (+) | noncoding (-0.0475136) | - | 89 | 14.77 | 2 | ||
CNT30509360 | Solanum lycopersicum | 4:52020558-52022069 (+) | noncoding (-0.0004096) | - | 55 | 47.07 | 2 | ||
CNT30509359 | Solanum lycopersicum | 4:7299199-7301514 (-) | noncoding (-0.0004096) | - | - | 3.3 | 2 | ||
CNT30509358 | Solanum lycopersicum | 4:23095645-23096511 (+) | noncoding (-0.0004096) | - | 44 | 7.47 | 2 | ||
CNT30509357 | Solanum lycopersicum | 4:290581-292444 (+) | noncoding (-0.032768) | - | 72 | 52.74 | 2 | Expressed preferentially in root | |
CNT30509356 | Solanum lycopersicum | 4:33371872-33374396 (+) | noncoding (-0.0004096) | - | - | 5.32 | 2 | ||
CNT30509355 | Solanum lycopersicum | 4:51321624-51323687 (+) | coding (0.046) | - | 81 | 5.41 | 2 | Expressed preferentially in root | |
CNT30509354 | Solanum lycopersicum | 4:60517245-60524514 (+) | noncoding (-0.024576) | 5e-156 (sp|O82161|PHI1_TOBAC) | 39 | 18.12 | 2 | Conserved counterparts: CNT3093248 Expressed preferentially in root |
|
CNT30509353 | Solanum lycopersicum | 4:7296334-7301495 (-) | noncoding (-0.0004096) | - | - | 9.71 | 3 | ||
CNT30509352 | Solanum lycopersicum | 4:9484656-9488770 (+) | noncoding (-0.0004096) | - | 71 | 24.2 | 2 | Conserved counterparts: CNT3092592 | |
CNT30509350 | Solanum lycopersicum | 4:60517249-60520690 (+) | noncoding (-0.0004096) | 3e-91 (sp|O82161|PHI1_TOBAC) | 32 | 65.64 | 2 | Conserved counterparts: CNT3093248 Expressed preferentially in root |
|
CNT30509349 | Solanum lycopersicum | 4:15942943-15955673 (+) | noncoding (-0.094208) | - | 81 | 1.24 | 2 | ||
CNT30509348 | Solanum lycopersicum | 4:34193120-34202109 (-) | noncoding (-0.049152) | - | 31 | 3.53 | 2 | ||
CNT30509347 | Solanum lycopersicum | 4:63670805-63671533 (-) | noncoding (-0.0004096) | - | - | 500.69 | 2 | Expressed preferentially in root | |
CNT30509346 | Solanum lycopersicum | 4:1812258-1820562 (+) | noncoding (-0.045056) | 4e-31 (sp|Q6L3L0|R1B23_SOLDE) | 50 | 11 | 2 | Expressed preferentially in root |