SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 2749 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30520809 Setaria italica III:50374927-50376915 (+) coding (0.288)5e-47 (sp|Q9SI18|PPA11_ARATH) 62 0.13 4Conserved counterparts:
CNT30520808 Setaria italica III:7727526-7728034 (+) noncoding (-0.0155648)- 82 0.44 2
CNT30520807 Setaria italica III:38279764-38282050 (-) coding (0.217)- 86 0.7 1
CNT30520806 Setaria italica III:8424495-8431099 (-) coding (0.242)- 79 2.42 11Conserved counterparts:
CNT30520805 Setaria italica III:23156057-23157187 (-) coding (0.214)7e-93 (sp|P12257|GUB2_HORVU) 75 1.22 3Conserved counterparts:
CNT30520803 Setaria italica III:4116691-4117591 (+) coding (0.094)- 80 58.28 3Conserved counterparts:
CNT30520802 Setaria italica III:35159848-35161070 (+) coding (0.194)1e-48 (sp|P23993|PSAL_HORVU) 59 0.31 3Conserved counterparts:
CNT30520798 Setaria italica III:8424303-8431080 (-) coding (0.242)5e-63 (sp|Q147F9|AATPC_ARATH) 82 0.34 11Conserved counterparts:
CNT30520794 Setaria italica III:46946888-46949926 (-) noncoding (-0.0282624)- 62 71.8 2
CNT30520792 Setaria italica III:20621073-20621848 (-) coding (0.257)0.000000002 (sp|Q9FQA3|GST23_MAIZE) 68 0 2
CNT30520790 Setaria italica III:7337856-7339499 (+) coding (0.52)- 84 17.97 1Conserved counterparts:
CNT30520789 Setaria italica III:2327058-2328002 (-) coding (0.336)3e-108 (sp|Q9FR99|ACCO_MUSAC) 84 34.02 2Conserved counterparts:
CNT30520788 Setaria italica III:45891638-45891958 (-) noncoding (-0.049152)- 64 0 1
CNT30520785 Setaria italica III:45087610-45087993 (-) coding (0.023)- 81 28.83 2
CNT30520784 Setaria italica III:1176406-1176872 (+) noncoding (-0.0073728)- 83 18.51 1
CNT30520783 Setaria italica III:1200138-1200680 (-) noncoding (-0.086016)- 40 42.85 2
CNT30520781 Setaria italica III:35159802-35161012 (+) coding (0.317)6e-43 (sp|P23993|PSAL_HORVU) 59 0.35 3Conserved counterparts:
CNT30520778 Setaria italica III:26180200-26180990 (-) coding (0.093)- 81 51.16 2
CNT30520777 Setaria italica III:21266399-21266693 (-) coding (0.59)2e-45 (sp|Q42368|PPDK2_MAIZE) 87 0.37 2Conserved counterparts:
CNT30520776 Setaria italica III:3379873-3380640 (-) noncoding (-0.0237568)1e-89 (sp|Q0DKY4|METK1_ORYSJ) 47 304.77 2Conserved counterparts:
CNT30520775 Setaria italica III:39659341-39660413 (+) noncoding (-0.0229376)- 83 0 2
CNT30520774 Setaria italica III:35159799-35161070 (+) coding (0.25)5e-55 (sp|P23993|PSAL_HORVU) 91 31.87 2Conserved counterparts:
CNT30520773 Setaria italica III:1840388-1844079 (-) noncoding (-0.0638976)- 93 5.47 5Conserved counterparts:
CNT30520770 Setaria italica III:50346161-50349535 (+) coding (0.446)- 75 0.97 3Conserved counterparts:
CNT30520769 Setaria italica III:3379873-3380640 (-) noncoding (-0.0258048)1e-78 (sp|Q0DKY4|METK1_ORYSJ) 47 1.56 3Conserved counterparts:
CNT30520768 Setaria italica III:70915-71594 (+) noncoding (-0.008192)- 41 0.99 3
CNT30520765 Setaria italica III:23406413-23427528 (+) coding (0.116)0 (sp|O64937|EF1A_ORYSJ) 97 1.67 2Conserved counterparts:
CNT30520764 Setaria italica III:24074611-24103024 (-) noncoding (-0.0831488)9e-59 (sp|P05348|RBS_MAIZE) 35 4.16 2
CNT30520762 Setaria italica III:15540831-15541813 (+) coding (0.269)- 88 1.85 2
CNT30520761 Setaria italica III:41237902-41238225 (+) coding (0.376)8e-22 (sp|O65719|HSP7C_ARATH) 85 3.92 2Conserved counterparts:
CNT30520760 Setaria italica III:6512845-6556088 (-) noncoding (-0.258048)0.000000000000001 (sp|Q7XA42|RGA1_SOLBU) 33 2.02 2
CNT30520758 Setaria italica II:4260481-4261040 (+) coding (0.224)9e-31 (sp|P14897|ELI9_HORVU) 70 0.28 2
CNT30520756 Setaria italica II:41255712-41256251 (-) coding (0.146)- 97 124.82 2
CNT30520748 Setaria italica II:41043237-41045343 (+) noncoding (-0.0626688)- 59 3.07 3
CNT30520747 Setaria italica II:23092504-23092909 (+) noncoding (-0.0253952)- - 24.01 1
CNT30520745 Setaria italica II:48484766-48485942 (-) noncoding (-0.098304)- 43 5.13 1
CNT30520742 Setaria italica II:27556382-27557212 (-) noncoding (-0.0311296)- 96 5.16 2
CNT30520741 Setaria italica II:30721568-30721888 (+) coding (0.376)- 91 1.96 2
CNT30520740 Setaria italica II:5585776-5587004 (-) noncoding (-0.172032)- 55 5.76 2
CNT30520729 Setaria italica II:47527077-47527837 (+) coding (0.44)- 70 0.26 2Conserved counterparts:
CNT30520727 Setaria italica II:47527252-47527944 (+) coding (0.539)- 62 0.43 2Conserved counterparts:
CNT30520726 Setaria italica II:25398724-25399183 (+) noncoding (-0.0512)- 64 0.92 3
CNT30520724 Setaria italica II:47527174-47527974 (+) coding (0.392)6e-19 (sp|Q39096|ERD15_ARATH) 62 3.29 2Conserved counterparts:
CNT30520721 Setaria italica II:40520078-40521933 (-) noncoding (-0.0405504)5e-168 (sp|O64477|Y2913_ARATH) 68 11.7 1Conserved counterparts:
CNT30520718 Setaria italica II:15728808-15731197 (+) coding (0.319)0.000002 (sp|O04023|SRC2_ARATH) 60 201.29 1Conserved counterparts:
CNT30520717 Setaria italica II:42515654-42516427 (-) coding (0.139)- 96 20.65 2Conserved counterparts:
CNT30520716 Setaria italica II:47451832-47456960 (-) noncoding (-0.0176128)- 66 0.83 4
CNT30520715 Setaria italica II:6964660-6965738 (-) noncoding (-0.14336)0.000000000000002 (sp|Q2R2D5|XA21_ORYSJ) 76 2.59 2
CNT30520713 Setaria italica II:43726197-43727831 (-) noncoding (-0.016384)- 78 5.27 2
CNT30520712 Setaria italica II:27683652-27684467 (-) noncoding (-0.0417792)- 78 6.21 3