CNCI status: | # |
Max. peptide length: | # |
Is conserved: | # |
Organ specific: | # |
Max. expression: | # |
No. of exons: | # |
Order by: | lncRNA ID |
Record details | CANTATAdb ID | Species | Location | CNCI status (score) | Swiss-Prot best hit | Max. peptide length | Max. expression | No. of exons | Additional notes |
---|---|---|---|---|---|---|---|---|---|
CNT30520899 | Setaria italica | III:24069120-24102808 (-) | coding (0.147) | 1e-75 (sp|P05348|RBS_MAIZE) | 54 | 34.94 | 2 | Expressed preferentially in root | |
CNT30520896 | Setaria italica | III:23406413-23427528 (+) | coding (0.144) | 7e-175 (sp|O64937|EF1A_ORYSJ) | 97 | 1.58 | 3 | Conserved counterparts: CNT3011166, CNT3020462 Expressed preferentially in leaf |
|
CNT30520895 | Setaria italica | III:7338128-7339059 (+) | coding (0.543) | - | 88 | 114.97 | 2 | Conserved counterparts: CNT30460807 | |
CNT30520893 | Setaria italica | III:10747017-10747411 (+) | coding (0.177) | 3e-24 (sp|O65101|PSAH_MAIZE) | 34 | 1.63 | 2 | Expressed preferentially in root | |
CNT30520892 | Setaria italica | III:13021119-13027629 (+) | noncoding (-0.0114688) | - | 89 | 45.76 | 3 | Expressed preferentially in leaf | |
CNT30520889 | Setaria italica | III:24102022-24102839 (-) | coding (0.13) | 7e-28 (sp|P26573|RBS_NICPL) | 54 | 15.55 | 2 | Expressed preferentially in root | |
CNT30520888 | Setaria italica | III:37910697-37960592 (-) | noncoding (-0.0139264) | 8e-35 (sp|P05348|RBS_MAIZE) | 64 | 3.71 | 3 | Expressed preferentially in root | |
CNT30520887 | Setaria italica | III:12677085-12684375 (+) | coding (0.138) | - | 66 | 4.85 | 2 | ||
CNT30520884 | Setaria italica | III:3258920-3260303 (+) | noncoding (-0.0557056) | - | 72 | 12.27 | 3 | Conserved counterparts: CNT30576354 Expressed preferentially in leaf |
|
CNT30520882 | Setaria italica | III:34153985-34159760 (-) | coding (0.119) | - | 61 | 25.57 | 5 | Expressed preferentially in leaf | |
CNT30520879 | Setaria italica | III:49802215-49802575 (-) | noncoding (-0.0700416) | - | 62 | 0.91 | 2 | ||
CNT30520876 | Setaria italica | III:21432232-21432680 (-) | coding (0.437) | - | 95 | 0.54 | 2 | ||
CNT30520875 | Setaria italica | III:12270315-12272236 (+) | coding (0.42) | - | 54 | 7.21 | 2 | Expressed preferentially in root | |
CNT30520874 | Setaria italica | III:25348541-25348996 (+) | noncoding (-0.067584) | - | 47 | 24 | 2 | Expressed preferentially in root | |
CNT30520872 | Setaria italica | III:10544731-10553501 (+) | noncoding (-0.14377) | 1e-42 (sp|Q9FFH6|FLA13_ARATH) | 35 | 357.1 | 2 | Conserved counterparts: CNT30472856, CNT30595703 Expressed preferentially in leaf |
|
CNT30520871 | Setaria italica | III:34367953-34370781 (+) | noncoding (-0.0180224) | - | 98 | 3.01 | 4 | Expressed preferentially in leaf | |
CNT30520870 | Setaria italica | III:3380050-3380769 (-) | noncoding (-0.0405504) | 5e-58 (sp|Q0DKY4|METK1_ORYSJ) | 43 | 1.44 | 2 | Conserved counterparts: CNT30515028, CNT3090332, CNT30725876, CNT30158121, CNT30597069, CNT30116854, CNT30101941, CNT30561874, CNT30113329, CNT30508528, CNT3017355, CNT30570674, CNT30712616, CNT3035650 Expressed preferentially in root |
|
CNT30520869 | Setaria italica | III:14188731-14189938 (+) | coding (0.116) | - | 84 | 7.49 | 2 | ||
CNT30520866 | Setaria italica | III:23406414-23426596 (+) | noncoding (-0.0495616) | 0.0000000000007 (sp|P50378|EFTU_GONPE) | 97 | 0.99 | 4 | Conserved counterparts: CNT3011166, CNT3020462 Expressed preferentially in leaf |
|
CNT30520865 | Setaria italica | III:50374936-50376812 (+) | coding (0.325) | 1e-146 (sp|Q9SIV9|PPA10_ARATH) | 66 | 0.11 | 3 | Conserved counterparts: CNT30449700 Expressed preferentially in root |
|
CNT30520863 | Setaria italica | III:2622771-2623062 (-) | noncoding (-0.126566) | - | 82 | 4.04 | 2 | Conserved counterparts: CNT30472235 | |
CNT30520862 | Setaria italica | III:24069120-24102954 (-) | coding (0.135) | 7e-64 (sp|P05348|RBS_MAIZE) | 68 | 2.9 | 2 | Expressed preferentially in root | |
CNT30520861 | Setaria italica | III:24069235-24102827 (-) | noncoding (-0.0401408) | 7e-54 (sp|P05348|RBS_MAIZE) | 54 | 23.58 | 3 | Expressed preferentially in root | |
CNT30520860 | Setaria italica | III:43489640-43490218 (+) | noncoding (-0.147456) | 0.000000000002 (sp|P86902|CYCP_CLITE) | 55 | 109.61 | 1 | Expressed preferentially in root | |
CNT30520858 | Setaria italica | III:50375027-50376863 (+) | coding (0.306) | 8e-83 (sp|Q9C927|PPA5_ARATH) | 86 | 1.02 | 4 | Conserved counterparts: CNT30449700 Expressed preferentially in root |
|
CNT30520857 | Setaria italica | III:35159802-35161012 (+) | noncoding (-0.0704512) | - | 91 | 29.85 | 2 | Conserved counterparts: CNT304588, CNT30712288 Expressed preferentially in root |
|
CNT30520856 | Setaria italica | III:19527171-19527656 (+) | noncoding (-0.008192) | - | 43 | 1.27 | 2 | ||
CNT30520855 | Setaria italica | III:7063162-7096571 (+) | noncoding (-0.016384) | 3e-22 (sp|Q9LRR4|R13L1_ARATH) | 60 | 1.53 | 2 | Conserved counterparts: CNT30692575 | |
CNT30520852 | Setaria italica | III:28757873-28759118 (-) | noncoding (-0.0004096) | - | 55 | 3.7 | 2 | ||
CNT30520850 | Setaria italica | III:23156383-23157100 (-) | coding (0.237) | 5e-99 (sp|P12257|GUB2_HORVU) | 70 | 0.4 | 2 | Conserved counterparts: CNT30227996, CNT30574670 | |
CNT30520849 | Setaria italica | III:49854547-49855041 (+) | coding (0.468) | 1e-18 (sp|Q9FHQ6|UBQ9_ARATH) | 68 | 0.7 | 2 | ||
CNT30520847 | Setaria italica | III:38100094-38101121 (+) | noncoding (-0.028672) | 5e-19 (sp|P13951|RBS_SINAL) | 36 | 1.05 | 3 | Conserved counterparts: CNT30578613, CNT30597241, CNT30118102, CNT30104624 Expressed preferentially in root |
|
CNT30520846 | Setaria italica | III:50375027-50376863 (+) | coding (0.334) | 4e-86 (sp|Q9SIV9|PPA10_ARATH) | 86 | 0.21 | 4 | Conserved counterparts: CNT30449700 Expressed preferentially in root |
|
CNT30520844 | Setaria italica | III:2785757-2789780 (-) | coding (0.3) | - | - | 0.79 | 3 | Conserved counterparts: CNT3077544 | |
CNT30520843 | Setaria italica | III:41125368-41126216 (-) | coding (0.071) | - | 76 | 7.93 | 3 | Expressed preferentially in root | |
CNT30520842 | Setaria italica | III:21021689-21022209 (-) | coding (0.3) | 2e-106 (sp|O22567|DXS1_ORYSJ) | 81 | 0.26 | 2 | ||
CNT30520839 | Setaria italica | III:2622759-2624008 (-) | coding (0.277) | - | 64 | 56.19 | 3 | Conserved counterparts: CNT30471869 | |
CNT30520831 | Setaria italica | III:24287706-24288442 (-) | noncoding (-0.0004096) | - | 39 | 1.86 | 1 | ||
CNT30520830 | Setaria italica | III:28215274-28215571 (-) | noncoding (-0.0479232) | - | 56 | 6.97 | 1 | ||
CNT30520829 | Setaria italica | III:21020078-21021544 (-) | coding (0.052) | - | 93 | 1.52 | 2 | ||
CNT30520827 | Setaria italica | III:50374975-50376609 (+) | coding (0.334) | 5e-140 (sp|Q9SIV9|PPA10_ARATH) | 66 | 0.11 | 4 | Conserved counterparts: CNT30449700 Expressed preferentially in root |
|
CNT30520824 | Setaria italica | III:24069434-24103007 (-) | noncoding (-0.0167936) | 5e-42 (sp|P05348|RBS_MAIZE) | 37 | 0.7 | 3 | Expressed preferentially in root | |
CNT30520821 | Setaria italica | III:4187575-4187873 (+) | noncoding (-0.0049152) | - | 41 | 0 | 2 | Expressed preferentially in leaf | |
CNT30520819 | Setaria italica | III:38831479-38831851 (-) | coding (0.087) | - | 89 | 17.2 | 2 | ||
CNT30520816 | Setaria italica | III:3379810-3380714 (-) | coding (0.218) | 1e-129 (sp|Q0DKY4|METK1_ORYSJ) | 72 | 0.89 | 2 | Conserved counterparts: CNT30515028, CNT3090332, CNT30725876, CNT30158121, CNT30597069, CNT30116854, CNT30101941, CNT30561874, CNT30113329, CNT30508528, CNT3017355, CNT30570674, CNT30712616, CNT3035650, CNT30212612 Expressed preferentially in root |
|
CNT30520814 | Setaria italica | III:23406414-23426596 (+) | coding (0.099) | 9e-154 (sp|O64937|EF1A_ORYSJ) | 97 | 0 | 3 | Conserved counterparts: CNT3011166, CNT3020462 Expressed preferentially in leaf |
|
CNT30520813 | Setaria italica | III:11619869-11624859 (+) | noncoding (-0.156058) | - | 73 | 9.86 | 4 | ||
CNT30520812 | Setaria italica | III:24069381-24102966 (-) | coding (0.195) | 2e-67 (sp|P05348|RBS_MAIZE) | 35 | 0.72 | 2 | Expressed preferentially in root | |
CNT30520811 | Setaria italica | III:21395712-21396181 (-) | noncoding (-0.02048) | - | 43 | 6.58 | 2 | Expressed preferentially in root | |
CNT30520810 | Setaria italica | III:44059689-44060521 (+) | coding (0.204) | - | 77 | 144.93 | 2 | Expressed preferentially in root |