CNCI status: | # |
Max. peptide length: | # |
Is conserved: | # |
Organ specific: | # |
Max. expression: | # |
No. of exons: | # |
Order by: | lncRNA ID |
Record details | CANTATAdb ID | Species | Location | CNCI status (score) | Swiss-Prot best hit | Max. peptide length | Max. expression | No. of exons | Additional notes |
---|---|---|---|---|---|---|---|---|---|
CNT30520991 | Setaria italica | III:42257935-42259497 (-) | noncoding (-0.057344) | - | 64 | 4.7 | 2 | Expressed preferentially in leaf | |
CNT30520989 | Setaria italica | III:46478987-46479563 (+) | noncoding (-0.0598016) | - | 44 | 6.86 | 2 | Expressed preferentially in root | |
CNT30520985 | Setaria italica | III:479338-479802 (+) | noncoding (-0.166298) | 0.00000000008 (sp|Q9LXM2|CAF1I_ARATH) | 79 | 0.62 | 2 | ||
CNT30520983 | Setaria italica | III:45369656-45370293 (-) | coding (0.373) | - | 97 | 69.89 | 2 | Expressed preferentially in leaf | |
CNT30520981 | Setaria italica | III:4009161-4009722 (-) | noncoding (-0.008192) | - | 53 | 0.46 | 2 | Conserved counterparts: CNT30473612 | |
CNT30520980 | Setaria italica | III:27173781-27174317 (+) | coding (0.195) | 0.0000007 (sp|B8AWM1|WK452_ORYSI) | 65 | 2.23 | 2 | ||
CNT30520979 | Setaria italica | III:46946888-46949926 (-) | noncoding (-0.188416) | - | 64 | 4.51 | 3 | Expressed preferentially in stem | |
CNT30520978 | Setaria italica | III:6932134-6932629 (-) | noncoding (-0.0004096) | - | 62 | 0.28 | 2 | ||
CNT30520977 | Setaria italica | III:33993986-33995355 (-) | noncoding (-0.0700416) | - | 61 | 1.95 | 2 | ||
CNT30520976 | Setaria italica | III:13756492-13758363 (+) | coding (0.364) | - | 92 | 16.53 | 1 | Expressed preferentially in root | |
CNT30520974 | Setaria italica | III:10746538-10747389 (+) | noncoding (-0.0151552) | 2e-18 (sp|P20121|PSAH_PEA) | 44 | 58.13 | 2 | Expressed preferentially in root | |
CNT30520973 | Setaria italica | III:38667956-38668976 (-) | noncoding (-0.028672) | - | 49 | 73.84 | 1 | Expressed preferentially in stem | |
CNT30520972 | Setaria italica | III:2674244-2676224 (-) | noncoding (-0.158106) | - | 61 | 6.88 | 2 | Expressed preferentially in root | |
CNT30520971 | Setaria italica | III:8424705-8431088 (-) | coding (0.242) | - | 81 | 5.1 | 10 | Conserved counterparts: CNT30472871 Expressed preferentially in root |
|
CNT30520968 | Setaria italica | III:23156057-23157225 (-) | coding (0.254) | 3e-85 (sp|P12257|GUB2_HORVU) | 63 | 0.64 | 3 | Conserved counterparts: CNT30227996, CNT30574670 | |
CNT30520966 | Setaria italica | III:7447575-7448471 (+) | coding (0.268) | - | 73 | 1.43 | 3 | Conserved counterparts: CNT30101767 Expressed preferentially in stem |
|
CNT30520965 | Setaria italica | III:11236344-11237548 (-) | noncoding (-0.045056) | - | 59 | 5.19 | 4 | Expressed preferentially in leaf | |
CNT30520962 | Setaria italica | III:23406414-23489509 (+) | coding (0.143) | 0 (sp|O64937|EF1A_ORYSJ) | 97 | 9.53 | 4 | Conserved counterparts: CNT3020462 Expressed preferentially in leaf |
|
CNT30520961 | Setaria italica | III:24069434-24102966 (-) | noncoding (-0.0643072) | 1e-67 (sp|P05348|RBS_MAIZE) | 38 | 1.43 | 3 | Expressed preferentially in root | |
CNT30520958 | Setaria italica | III:17574761-17576503 (-) | coding (0.226) | 0 (sp|P09189|HSP7C_PETHY) | 93 | 0.12 | 4 | Conserved counterparts: CNT30231854, CNT30451043, CNT30578076, CNT30595552, CNT30697339 Expressed preferentially in leaf |
|
CNT30520957 | Setaria italica | III:35364313-35365021 (+) | noncoding (-0.083968) | - | 81 | 11.74 | 2 | Expressed preferentially in root | |
CNT30520955 | Setaria italica | III:41221270-41221851 (-) | noncoding (-0.0282624) | 3e-34 (sp|A2ZLU6|SL11_ORYSI) | 80 | 0.21 | 2 | Conserved counterparts: CNT30450644 | |
CNT30520954 | Setaria italica | III:44059635-44060505 (+) | coding (0.25) | - | 79 | 4.1 | 2 | Conserved counterparts: CNT30451841 Expressed preferentially in root |
|
CNT30520953 | Setaria italica | III:29582890-29583643 (+) | noncoding (-0.04096) | - | 68 | 1.19 | 2 | ||
CNT30520952 | Setaria italica | III:26180079-26180534 (-) | coding (0.245) | - | 100 | 4.63 | 2 | Expressed preferentially in root | |
CNT30520949 | Setaria italica | III:13021185-13027629 (+) | noncoding (-0.0053248) | - | 80 | 22.39 | 4 | Expressed preferentially in leaf | |
CNT30520948 | Setaria italica | III:38098568-38101121 (+) | noncoding (-0.0159744) | - | 54 | 2.6 | 3 | Conserved counterparts: CNT30578612, CNT30597241, CNT30118025, CNT30104669 Expressed preferentially in root |
|
CNT30520947 | Setaria italica | III:16112573-16113372 (+) | noncoding (-0.032768) | - | 45 | 8.62 | 2 | Expressed preferentially in root | |
CNT30520944 | Setaria italica | III:21432808-21433592 (-) | noncoding (-0.024576) | - | 48 | 0.29 | 2 | Conserved counterparts: CNT3013983 | |
CNT30520941 | Setaria italica | III:23406400-23489514 (+) | coding (0.115) | 0 (sp|O64937|EF1A_ORYSJ) | 97 | 148.62 | 2 | Conserved counterparts: CNT3020462 Expressed preferentially in leaf |
|
CNT30520940 | Setaria italica | III:6988884-6989444 (+) | noncoding (-0.22528) | - | 86 | 22.06 | 2 | ||
CNT30520938 | Setaria italica | III:35341119-35342796 (+) | noncoding (-0.0393216) | - | 75 | 4.76 | 2 | ||
CNT30520937 | Setaria italica | III:22570892-22571348 (-) | noncoding (-0.032768) | - | 78 | 12.44 | 2 | ||
CNT30520934 | Setaria italica | III:47780280-47782169 (+) | coding (0.334) | 9e-21 (sp|Q67YI6|ATL65_ARATH) | 68 | 24.83 | 1 | Expressed preferentially in root | |
CNT30520933 | Setaria italica | III:49361585-49362163 (-) | coding (0.24) | - | 98 | 0.23 | 2 | ||
CNT30520932 | Setaria italica | III:4009161-4009691 (-) | noncoding (-0.0176128) | - | 43 | 0.25 | 2 | Conserved counterparts: CNT30473612 | |
CNT30520931 | Setaria italica | III:6420495-6422472 (-) | coding (0.196) | - | 53 | 2.78 | 2 | ||
CNT30520930 | Setaria italica | III:23512178-23512620 (+) | coding (0.355) | 1e-33 (sp|Q41803|EF1A_MAIZE) | 71 | 0.42 | 2 | Conserved counterparts: CNT3011182 Expressed preferentially in leaf |
|
CNT30520929 | Setaria italica | III:23269317-23284630 (+) | coding (0.076) | - | 82 | 2.03 | 2 | ||
CNT30520928 | Setaria italica | III:39670217-39672490 (+) | noncoding (-0.106496) | - | 83 | 3.19 | 1 | Expressed preferentially in leaf | |
CNT30520920 | Setaria italica | III:35159833-35161069 (+) | coding (0.319) | 2e-67 (sp|P23993|PSAL_HORVU) | 87 | 3.31 | 2 | Conserved counterparts: CNT304588, CNT30712288 Expressed preferentially in root |
|
CNT30520918 | Setaria italica | III:42576782-42577371 (+) | noncoding (-0.274432) | - | 76 | 7.62 | 2 | ||
CNT30520914 | Setaria italica | III:6982465-6983085 (+) | noncoding (-0.121242) | - | 83 | 168.99 | 1 | ||
CNT30520913 | Setaria italica | III:220986-221665 (+) | noncoding (-0.004096) | - | 85 | 6.27 | 2 | ||
CNT30520909 | Setaria italica | III:20690644-20690916 (+) | noncoding (-0.124928) | - | 74 | 2.75 | 2 | ||
CNT30520908 | Setaria italica | III:30265775-30266112 (+) | noncoding (-0.0745472) | - | 64 | 7.28 | 1 | ||
CNT30520906 | Setaria italica | III:13713029-13739862 (+) | noncoding (-0.240845) | - | 58 | 546.96 | 2 | Expressed preferentially in leaf | |
CNT30520905 | Setaria italica | III:44170780-44171469 (+) | noncoding (-0.0118784) | 2e-56 (sp|A2ZLC1|PETS_ORYSI) | 84 | 2.45 | 2 | ||
CNT30520902 | Setaria italica | III:16462607-16463127 (+) | noncoding (-0.0925696) | - | 88 | 0 | 2 | ||
CNT30520901 | Setaria italica | III:2657175-2657743 (-) | noncoding (-0.0004096) | - | 35 | 4.97 | 2 |