SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 6775 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Additional notes
CNT30376528 Arabidopsis thaliana 4:16227898-16231248 (+) noncoding (-0.0004096)7e-39 (sp|Q84WT5|XYN5L_ARATH) 49 2.84 2
CNT30376527 Arabidopsis thaliana 4:14573324-14573710 (+) noncoding (-0.0004096)- 34 1.25 2
CNT30376526 Arabidopsis thaliana 4:8843596-8844925 (-) noncoding (-0.115507)- 43 0.69 2Conserved counterparts: CNT30260830
CNT30376525 Arabidopsis thaliana 4:16961582-16962409 (+) coding (0.194)- 66 0.2 3Conserved counterparts: CNT30536082, CNT3079663, CNT30559586, CNT30121168
CNT30376524 Arabidopsis thaliana 4:6269645-6270101 (-) noncoding (-0.016384)2e-78 (sp|Q9T0G0|HSD5_ARATH) 34 133.8 2
CNT30376523 Arabidopsis thaliana 4:16037779-16038165 (+) noncoding (-0.0004096)- 41 3.55 1
CNT30376522 Arabidopsis thaliana 4:10391031-10391452 (+) noncoding (-0.0004096)- 31 0.83 1
CNT30376521 Arabidopsis thaliana 4:12841975-12842181 (-) noncoding (-0.0004096)- 60 1.76 1
CNT30376520 Arabidopsis thaliana 4:7013174-7013585 (+) noncoding (-0.0872448)- 95 8.06 2
CNT30376519 Arabidopsis thaliana 4:17280528-17282730 (-) noncoding (-0.049152)- 59 43.44 2Conserved counterparts: CNT30263751, CNT3078850, CNT30613575, CNT30418144
CNT30376518 Arabidopsis thaliana 4:1114529-1114766 (+) noncoding (-0.0004096)- 32 2.71 1
CNT30376517 Arabidopsis thaliana 4:18574503-18575585 (-) noncoding (-0.06144)- 52 225.4 1
CNT30376516 Arabidopsis thaliana 4:8646160-8647053 (-) noncoding (-0.115917)0.00000000003 (sp|Q9SU35|ERLL1_ARATH) 81 0.35 2Conserved counterparts: CNT30263705, CNT3076660
Expressed preferentially in seed
CNT30376515 Arabidopsis thaliana 4:10944751-10945247 (-) noncoding (-0.0004096)- 35 9.55 1
CNT30376514 Arabidopsis thaliana 4:9172664-9173013 (-) noncoding (-0.0004096)0.00000002 (sp|A5HII1|ACTN_ACTDE) - 2.8 2
CNT30376513 Arabidopsis thaliana 4:8274169-8274609 (+) noncoding (-0.028672)- 47 0.16 2
CNT30376512 Arabidopsis thaliana 4:2075902-2076243 (+) noncoding (-0.0974848)- 55 0 1
CNT30376511 Arabidopsis thaliana 4:10355994-10356333 (+) noncoding (-0.0004096)- 67 1.66 1
CNT30376510 Arabidopsis thaliana 4:8425991-8426365 (+) noncoding (-0.0004096)- 38 19.54 1
CNT30376509 Arabidopsis thaliana 4:1533414-1533620 (+) noncoding (-0.0004096)0.0000002 (sp|Q8LPS2|ACD6_ARATH) - 4.52 1
CNT30376508 Arabidopsis thaliana 4:88123-88476 (-) noncoding (-0.0004096)- - 0 1
CNT30376507 Arabidopsis thaliana 4:15190804-15201310 (-) noncoding (-0.0004096)- 33 33.47 2Conserved counterparts: CNT3078696
Expressed preferentially in flower
CNT30376506 Arabidopsis thaliana 4:1405104-1405526 (+) noncoding (-0.090112)2e-81 (sp|Q9ZR12|GRH1_ARATH) 64 46.75 1
CNT30376505 Arabidopsis thaliana 4:5254688-5254959 (-) noncoding (-0.086016)- 45 18.61 1
CNT30376504 Arabidopsis thaliana 4:13250324-13250814 (+) noncoding (-0.0004096)- 40 2.79 2
CNT30376503 Arabidopsis thaliana 4:1318727-1319179 (-) noncoding (-0.200704)- 32 707.34 2Expressed preferentially in flower
CNT30376502 Arabidopsis thaliana 4:17191429-17192406 (+) noncoding (-0.0589824)- 62 8.97 2Expressed preferentially in flower
CNT30376501 Arabidopsis thaliana 4:9390464-9390930 (+) noncoding (-0.022528)1e-53 (sp|F4JMJ3|DEAH8_ARATH) 83 8.47 1
CNT30376500 Arabidopsis thaliana 4:10178506-10178994 (-) noncoding (-0.04096)- 53 28.39 1
CNT30376499 Arabidopsis thaliana 4:7560071-7563847 (-) noncoding (-0.057344)0.00000000000002 (sp|Q8RXN3|PPT1_ARATH) 39 28.58 3Expressed preferentially in seed
CNT30376498 Arabidopsis thaliana 4:17646613-17649951 (-) noncoding (-0.0651264)- 49 2.37 6
CNT30376497 Arabidopsis thaliana 4:6955093-6955472 (+) noncoding (-0.155648)- 37 0 1
CNT30376496 Arabidopsis thaliana 4:16562391-16562953 (+) noncoding (-0.217088)- - 2.57 2Expressed preferentially in seed
CNT30376495 Arabidopsis thaliana 4:15033619-15033900 (+) noncoding (-0.0004096)- 37 2.26 1
CNT30376494 Arabidopsis thaliana 4:18164147-18165749 (+) noncoding (-0.0724992)- 58 1566.73 2Conserved counterparts: CNT3075755, CNT30477160
CNT30376493 Arabidopsis thaliana 4:13453804-13454670 (-) noncoding (-0.045056)- 64 7.12 2Conserved counterparts: CNT3079275, CNT30613398
CNT30376492 Arabidopsis thaliana 4:2168144-2168414 (+) noncoding (-0.0004096)- 45 0.7 1
CNT30376491 Arabidopsis thaliana 4:12495023-12495227 (-) noncoding (-0.0004096)- 41 3.09 1
CNT30376489 Arabidopsis thaliana 4:395956-396236 (-) noncoding (-0.0094208)- 34 0.23 1
CNT30376488 Arabidopsis thaliana 4:16743772-16746971 (-) noncoding (-0.0004096)- 58 2.5 3Expressed preferentially in seed
CNT30376487 Arabidopsis thaliana 4:14545915-14546278 (+) noncoding (-0.0004096)- 39 2.31 1
CNT30376486 Arabidopsis thaliana 4:13318246-13318446 (+) noncoding (-0.0004096)- 49 6.41 1
CNT30376485 Arabidopsis thaliana 4:7784045-7785281 (-) noncoding (-0.0258048)- 72 0.44 3Expressed preferentially in flower
CNT30376484 Arabidopsis thaliana 4:7888862-7889072 (-) noncoding (-0.0004096)- 31 56.68 1
CNT30376483 Arabidopsis thaliana 4:945870-946223 (+) noncoding (-0.008192)- 38 0.93 2
CNT30376482 Arabidopsis thaliana 4:7091754-7092131 (-) noncoding (-0.0147456)- - 1.06 2
CNT30376481 Arabidopsis thaliana 4:10180117-10180748 (+) noncoding (-0.036864)- 30 0.29 2
CNT30376480 Arabidopsis thaliana 4:17280528-17282730 (-) noncoding (-0.069632)- 59 326.11 2Conserved counterparts: CNT30263751, CNT3076665, CNT30613575, CNT30418144
CNT30376479 Arabidopsis thaliana 4:12495728-12496086 (-) noncoding (-0.0004096)- 59 1.01 1
CNT30376478 Arabidopsis thaliana 4:5390028-5406418 (+) noncoding (-0.045056)5e-36 (sp|O81472|MP3K2_ARATH) 74 25.53 2Conserved counterparts: CNT30228484, CNT30143975