SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 2749 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30521181 Setaria italica III:20949006-20949660 (+) coding (0.323)- - 9.07 2
CNT30521180 Setaria italica III:25993912-25994728 (+) noncoding (-0.0004096)2e-17 (sp|Q9SIZ0|DRE2H_ARATH) 98 5.66 2
CNT30521179 Setaria italica III:6091054-6091264 (+) noncoding (-0.155648)- 70 2.53 1
CNT30521178 Setaria italica III:2127637-2128169 (+) noncoding (-0.135168)- 51 321.98 2Conserved counterparts:
CNT30521172 Setaria italica III:2622768-2623074 (-) noncoding (-0.136806)- 80 5.91 2Conserved counterparts:
CNT30521169 Setaria italica III:7447832-7448478 (+) coding (0.386)4e-63 (sp|Q6L4N4|C3H35_ORYSJ) 90 177.38 2Conserved counterparts:
CNT30521167 Setaria italica III:4116588-4117609 (+) noncoding (-0.28672)- 92 0.7 2Conserved counterparts:
CNT30521165 Setaria italica III:13021185-13027629 (+) noncoding (-0.0053248)- 96 0 3
CNT30521164 Setaria italica III:16993402-16993797 (+) noncoding (-0.212992)- 86 128.52 2
CNT30521161 Setaria italica III:6719490-6721523 (-) noncoding (-0.0397312)- 59 188.56 2
CNT30521160 Setaria italica III:245089-245971 (-) coding (0.169)0.00000002 (sp|P84516|PER1_SORBI) 97 0.44 3
CNT30521159 Setaria italica III:21825946-21828776 (-) noncoding (-0.110182)- 80 15.49 3
CNT30521155 Setaria italica III:6814293-6814588 (+) noncoding (-0.197837)- 78 4.13 2
CNT30521153 Setaria italica III:7064031-7097344 (+) noncoding (-0.14336)3e-41 (sp|Q7XA40|RGA3_SOLBU) 60 2.02 2Conserved counterparts:
CNT30521152 Setaria italica III:21826019-21828775 (-) noncoding (-0.110182)- 83 7.9 3
CNT30521151 Setaria italica III:38267113-38267641 (+) coding (0.279)- 37 10.15 1
CNT30521150 Setaria italica III:16300907-16301115 (-) noncoding (-0.0004096)- - 9.37 1
CNT30521149 Setaria italica III:244662-245971 (-) coding (0.218)0.000000000000007 (sp|P84516|PER1_SORBI) 63 0.11 2
CNT30521147 Setaria italica III:17329695-17330175 (-) coding (0.235)- 81 5.44 2
CNT30521146 Setaria italica III:11488301-11489365 (+) coding (0.142)- 97 5.34 2
CNT30521141 Setaria italica III:4009181-4009724 (-) noncoding (-0.053248)- 36 0.48 2Conserved counterparts:
CNT30521139 Setaria italica III:41301476-41302542 (+) noncoding (-0.0421888)- 75 216.97 2Conserved counterparts:
CNT30521136 Setaria italica III:8243326-8244180 (+) noncoding (-0.167936)2e-90 (sp|Q6L4S0|DDB1_ORYSJ) 90 57.83 2
CNT30521135 Setaria italica III:49991553-50021842 (-) noncoding (-0.0270336)- 33 0.86 2
CNT30521134 Setaria italica III:50374975-50376609 (+) coding (0.337)1e-143 (sp|Q9SIV9|PPA10_ARATH) 59 0.2 4Conserved counterparts:
CNT30521132 Setaria italica III:3146198-3146934 (-) coding (0.342)- 100 1.84 2Conserved counterparts:
CNT30521130 Setaria italica III:14351777-14352959 (-) coding (0.227)- 66 34.41 1
CNT30521128 Setaria italica III:3379554-3380744 (-) coding (0.199)1e-83 (sp|Q944U4|METK_DENCR) 89 1.4 2Conserved counterparts:
CNT30521126 Setaria italica III:6514228-6557466 (-) noncoding (-0.008192)- 65 29.42 2
CNT30521125 Setaria italica III:3380048-3380724 (-) noncoding (-0.0913408)3e-75 (sp|Q0DKY4|METK1_ORYSJ) 39 47.95 2Conserved counterparts:
CNT30521123 Setaria italica III:42857367-42857853 (+) noncoding (-0.17408)3e-35 (sp|P24068|OCS1_MAIZE) 75 0.28 2
CNT30521122 Setaria italica III:43653848-43655218 (-) noncoding (-0.02048)- 98 14.46 2
CNT30521121 Setaria italica III:6814290-6814613 (+) noncoding (-0.226099)- 80 17.74 2
CNT30521119 Setaria italica III:27173348-27174317 (+) coding (0.355)8e-17 (sp|B8AWM1|WK452_ORYSI) 34 0.17 2
CNT30521114 Setaria italica III:2144219-2145974 (-) coding (0.25)- 99 1.57 2
CNT30521113 Setaria italica III:2623221-2623986 (-) coding (0.292)- 77 0.31 2Conserved counterparts:
CNT30521112 Setaria italica III:43968710-43969237 (-) noncoding (-0.008192)- 55 3.17 2
CNT30521110 Setaria italica III:12173348-12177217 (-) noncoding (-0.0090112)- 38 3.79 2
CNT30521109 Setaria italica III:7160960-7162583 (-) noncoding (-0.04096)- 74 18.67 2
CNT30521108 Setaria italica III:7728060-7729174 (+) noncoding (-0.0372736)- 62 21.63 2
CNT30521106 Setaria italica III:24069381-24103024 (-) noncoding (-0.0606208)3e-76 (sp|P05348|RBS_MAIZE) 35 3.74 2
CNT30521103 Setaria italica III:35159868-35161008 (+) coding (0.26)2e-43 (sp|P23993|PSAL_HORVU) 59 0.69 3Conserved counterparts:
CNT30521102 Setaria italica III:10684088-10684302 (+) noncoding (-0.0548864)- 71 43.5 1
CNT30521098 Setaria italica III:22885820-22887521 (-) noncoding (-0.0557056)- 82 2.87 2
CNT30521097 Setaria italica III:24102022-24102966 (-) noncoding (-0.0581632)7e-38 (sp|P07398|RBS3_WHEAT) 35 1.14 2
CNT30521096 Setaria italica III:6513328-6556661 (-) noncoding (-0.0004096)0.000000000005 (sp|Q7XA42|RGA1_SOLBU) 67 0.82 2
CNT30521095 Setaria italica III:24069434-24103007 (-) noncoding (-0.057344)3e-70 (sp|P05348|RBS_MAIZE) 37 0.69 2
CNT30521093 Setaria italica III:23406400-23489507 (+) coding (0.114)0 (sp|O64937|EF1A_ORYSJ) 97 102.09 3Conserved counterparts:
CNT30521090 Setaria italica III:8066194-8066880 (+) coding (0.485)- 95 32.02 2
CNT30521089 Setaria italica III:2164496-2175529 (-) noncoding (-0.104038)- 63 13.73 2Conserved counterparts: