SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3407 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30511845 Solanum lycopersicum 12:7003661-7013164 (-) noncoding (-0.0032768)- 89 3.17 2
CNT30511844 Solanum lycopersicum 12:13447124-13455472 (-) noncoding (-0.045056)- 70 7.38 4
CNT30511843 Solanum lycopersicum 12:44055828-44080883 (-) noncoding (-0.032768)- 68 11.31 5
CNT30511842 Solanum lycopersicum 12:67598576-67599230 (-) noncoding (-0.0004096)2e-87 (sp|Q8S8T4|UXS4_ARATH) 38 4.77 2Conserved counterparts:
CNT30511841 Solanum lycopersicum 12:26824461-26861408 (-) noncoding (-0.032768)- 31 3.18 2
CNT30511840 Solanum lycopersicum 12:53394606-53397388 (+) noncoding (-0.385024)- - 5.11 2
CNT30511838 Solanum lycopersicum 12:58627815-58628293 (-) noncoding (-0.028672)- 31 14.68 2Conserved counterparts:
CNT30511837 Solanum lycopersicum 12:4727620-4742892 (-) noncoding (-0.233472)- 60 2.17 3Conserved counterparts:
CNT30511836 Solanum lycopersicum 12:32945238-32948695 (+) noncoding (-0.0004096)- 38 9.08 3
CNT30511835 Solanum lycopersicum 12:41198761-41248580 (-) noncoding (-0.0004096)- 40 72.16 2Conserved counterparts:
CNT30511834 Solanum lycopersicum 12:38733806-38734181 (-) noncoding (-0.0008192)- - 1.04 2
CNT30511833 Solanum lycopersicum 12:25979403-25981612 (+) noncoding (-0.0004096)- 95 34.91 2
CNT30511832 Solanum lycopersicum 12:21830184-21832142 (+) noncoding (-0.172032)- 39 3.9 2
CNT30511831 Solanum lycopersicum 12:65032460-65033022 (+) noncoding (-0.08192)0.0000004 (sp|O48724|WEB1_ARATH) 49 1.78 2
CNT30511830 Solanum lycopersicum 12:17714203-17716271 (-) noncoding (-0.0004096)- 36 14.89 2
CNT30511829 Solanum lycopersicum 12:39566157-39569884 (-) noncoding (-0.0004096)- 42 2.23 2
CNT30511828 Solanum lycopersicum 12:43839883-43840406 (+) coding (0.03)0.000000000000001 (sp|Q8GYF7|NUP54_ARATH) 70 7.44 2
CNT30511827 Solanum lycopersicum 12:31056545-31058084 (-) noncoding (-0.0004096)- 46 23.69 1
CNT30511826 Solanum lycopersicum 12:67765198-67766436 (+) noncoding (-0.0004096)- 47 31.8 2Conserved counterparts:
CNT30511825 Solanum lycopersicum 12:62357233-62358376 (+) noncoding (-0.0290816)- 66 3.21 2
CNT30511823 Solanum lycopersicum 12:54876727-54889841 (+) noncoding (-0.0004096)- 45 0.08 2Conserved counterparts:
CNT30511822 Solanum lycopersicum 12:64930983-64931316 (+) noncoding (-0.0004096)- - 0.25 2
CNT30511821 Solanum lycopersicum 12:25762941-25763758 (-) noncoding (-0.008192)- 60 18.35 2
CNT30511820 Solanum lycopersicum 12:5231279-5238510 (+) noncoding (-0.104448)- 52 9.91 3
CNT30511819 Solanum lycopersicum 12:43566175-43571962 (-) noncoding (-0.036864)- 97 3.43 3
CNT30511818 Solanum lycopersicum 12:59133723-59134240 (+) noncoding (-0.0004096)0.00000000007 (sp|P42849|UMEC_ARMRU) 34 0 2
CNT30511817 Solanum lycopersicum 12:32187824-32190246 (-) noncoding (-0.0114688)- 43 5.54 1
CNT30511816 Solanum lycopersicum 12:3871061-3871819 (+) noncoding (-0.197018)- 44 2.83 2
CNT30511815 Solanum lycopersicum 12:38974587-38975491 (-) noncoding (-0.053248)- 35 6.25 2
CNT30511814 Solanum lycopersicum 12:63048757-63049931 (-) noncoding (-0.0004096)- 40 101.05 2
CNT30511813 Solanum lycopersicum 12:38755414-38762849 (+) noncoding (-0.0032768)6e-16 (sp|P0C2F6|RNHX1_ARATH) 87 9.89 1
CNT30511812 Solanum lycopersicum 12:35457682-35460125 (-) noncoding (-0.0393216)- 61 13.73 1
CNT30511811 Solanum lycopersicum 12:2359637-2365394 (+) noncoding (-0.036864)- 88 62.19 3
CNT30511810 Solanum lycopersicum 12:9996853-10005357 (+) noncoding (-0.0405504)- 69 17.1 2
CNT30511809 Solanum lycopersicum 12:3871061-3871819 (+) noncoding (-0.008192)- 44 0 3
CNT30511808 Solanum lycopersicum 12:47192753-47203159 (+) noncoding (-0.06144)- 34 3.52 2
CNT30511807 Solanum lycopersicum 12:67398967-67399959 (-) noncoding (-0.0802816)- - 0 2
CNT30511805 Solanum lycopersicum 12:56931089-56941331 (-) noncoding (-0.0004096)- 51 8.26 2
CNT30511804 Solanum lycopersicum 12:3308247-3311020 (-) noncoding (-0.065536)- 78 67.82 1
CNT30511803 Solanum lycopersicum 12:66057175-66065902 (+) noncoding (-0.024576)2e-84 (sp|Q40469|IF4A6_TOBAC) 80 70.42 2Conserved counterparts:
CNT30511802 Solanum lycopersicum 12:59330473-59334580 (-) noncoding (-0.0004096)- 39 43.69 2
CNT30511801 Solanum lycopersicum 12:31627083-31627844 (+) noncoding (-0.0004096)- 96 14.71 2
CNT30511800 Solanum lycopersicum 12:67146894-67154323 (+) noncoding (-0.178176)- 68 1980 4Conserved counterparts:
CNT30511798 Solanum lycopersicum 12:27874502-27876737 (-) noncoding (-0.135168)- 64 7.9 2
CNT30511797 Solanum lycopersicum 12:59182980-59183530 (+) noncoding (-0.0004096)- 92 29.63 2
CNT30511796 Solanum lycopersicum 12:537918-539154 (+) noncoding (-0.0004096)- 58 58.94 2
CNT30511795 Solanum lycopersicum 12:2922830-2923602 (+) noncoding (-0.0610304)- 63 25.39 2
CNT30511794 Solanum lycopersicum 12:24997007-25005687 (+) noncoding (-0.0004096)- 50 5.96 3
CNT30511793 Solanum lycopersicum 12:27988029-27989024 (+) noncoding (-0.182272)- 68 0.49 2
CNT30511792 Solanum lycopersicum 12:48480732-48481521 (-) noncoding (-0.0004096)- 42 4.43 2