SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 2749 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30521280 Setaria italica III:50404738-50440227 (+) noncoding (-0.02048)5e-27 (sp|Q9LRR4|R13L1_ARATH) 78 3.25 2
CNT30521277 Setaria italica III:45025260-45025523 (-) noncoding (-0.0958464)- 88 208.11 1
CNT30521275 Setaria italica III:2885396-2886649 (-) coding (0.178)- 94 3.45 2
CNT30521274 Setaria italica III:6201841-6202270 (-) noncoding (-0.0421888)0.0000000001 (sp|O80567|LRP6B_ARATH) 56 687.88 2
CNT30521273 Setaria italica III:9612068-9612405 (-) coding (0.492)- 86 1.76 2
CNT30521272 Setaria italica III:46946888-46949926 (-) noncoding (-0.086016)- 81 17.5 3
CNT30521271 Setaria italica III:15540851-15541788 (+) coding (0.245)- 96 5.12 3
CNT30521265 Setaria italica III:11432725-11433438 (+) coding (0.26)0.000000000000002 (sp|A2XBN5|NLTPX_ORYSI) - 5192.91 2
CNT30521262 Setaria italica III:14844630-14844884 (+) noncoding (-0.088064)- 58 3.39 1
CNT30521261 Setaria italica III:50356903-50376642 (+) coding (0.301)5e-73 (sp|Q9SE00|PPAF1_IPOBA) 31 80.84 3Conserved counterparts:
CNT30521260 Setaria italica III:27653220-27653605 (+) noncoding (-0.0004096)- 30 26.38 1
CNT30521258 Setaria italica III:3377737-3379275 (-) noncoding (-0.012288)- 94 1.56 2Conserved counterparts:
CNT30521257 Setaria italica III:47890570-47891203 (+) coding (0.216)- 82 3.74 1
CNT30521256 Setaria italica III:17480778-17481090 (-) coding (0.491)- 87 19.53 2Conserved counterparts:
CNT30521255 Setaria italica III:24069120-24102824 (-) coding (0.137)1e-93 (sp|P05348|RBS_MAIZE) 68 2.82 2
CNT30521250 Setaria italica III:18776952-18777585 (-) noncoding (-0.045056)2e-16 (sp|Q2Z2F6|H3L3_LILLO) 33 0.89 2Conserved counterparts:
CNT30521247 Setaria italica III:11835219-11835578 (+) noncoding (-0.075776)- 98 1.73 2
CNT30521246 Setaria italica III:7064031-7097647 (+) noncoding (-0.14336)3e-62 (sp|Q7XA40|RGA3_SOLBU) 60 0.24 2Conserved counterparts:
CNT30521245 Setaria italica III:13021187-13027585 (+) noncoding (-0.008192)- 96 44.92 2
CNT30521238 Setaria italica III:10746573-10747409 (+) noncoding (-0.053248)- 32 0.64 2
CNT30521236 Setaria italica III:46947772-46949919 (-) noncoding (-0.180224)- 79 13.37 2
CNT30521234 Setaria italica III:10746527-10747343 (+) noncoding (-0.117555)2e-22 (sp|O65101|PSAH_MAIZE) 48 10.54 2
CNT30521231 Setaria italica III:50374975-50376609 (+) coding (0.338)1e-174 (sp|Q9SDZ9|PPAF2_IPOBA) 66 4.43 3Conserved counterparts:
CNT30521230 Setaria italica III:3963365-3964108 (-) noncoding (-0.032768)5e-41 (sp|Q9M3B8|PHIP1_ARATH) 30 0.89 2
CNT30521225 Setaria italica III:18161743-18163675 (-) coding (0.23)- 73 2.25 1
CNT30521224 Setaria italica III:11962064-11962810 (+) noncoding (-0.0004096)- 39 7.04 2
CNT30521223 Setaria italica III:31439828-31441831 (-) noncoding (-0.0049152)- 95 5.89 3
CNT30521222 Setaria italica III:45706768-45707313 (-) coding (0.366)- 77 2.95 1
CNT30521220 Setaria italica III:8424729-8431085 (-) coding (0.242)- 81 1.88 10Conserved counterparts:
CNT30521218 Setaria italica III:23269550-23285104 (+) coding (0.152)0.0000000000007 (sp|P50378|EFTU_GONPE) 94 0.16 2
CNT30521214 Setaria italica III:35159868-35161008 (+) coding (0.345)4e-72 (sp|P23993|PSAL_HORVU) 87 1.69 2Conserved counterparts:
CNT30521213 Setaria italica III:11580734-11581769 (-) coding (0.102)0.000000002 (sp|W5U2K2|NMT_CATRO) 32 52.3 2
CNT30521211 Setaria italica III:41237880-41238225 (+) coding (0.515)7e-20 (sp|O65719|HSP7C_ARATH) 91 9.66 2Conserved counterparts:
CNT30521205 Setaria italica III:11314246-11315008 (+) noncoding (-0.024576)- 43 6.4 1
CNT30521203 Setaria italica III:24069443-24102981 (-) noncoding (-0.0393216)1e-53 (sp|P05348|RBS_MAIZE) 54 15.64 3
CNT30521202 Setaria italica III:23407109-23489514 (+) noncoding (-0.094208)2e-87 (sp|P17786|EF1A_SOLLC) 54 11.31 3Conserved counterparts:
CNT30521201 Setaria italica III:23406414-23426596 (+) coding (0.092)9e-154 (sp|O64937|EF1A_ORYSJ) 97 0 3Conserved counterparts:
CNT30521200 Setaria italica III:14843832-14845693 (-) noncoding (-0.0262144)- - 2.44 3
CNT30521198 Setaria italica III:42814135-42820300 (-) coding (0.024)- 79 2.92 3
CNT30521197 Setaria italica III:40181111-40183898 (-) noncoding (-0.0380928)- 99 6.73 5
CNT30521193 Setaria italica III:244658-245971 (-) coding (0.32)0.000003 (sp|P84516|PER1_SORBI) 55 0 3
CNT30521192 Setaria italica III:44313419-44313888 (+) coding (0.201)4e-37 (sp|Q2QP86|GRC15_ORYSJ) 91 0.97 2
CNT30521191 Setaria italica III:34153234-34159765 (-) coding (0.119)- 85 2.68 5
CNT30521190 Setaria italica III:41125404-41126210 (-) coding (0.056)- 77 3.32 3
CNT30521189 Setaria italica III:49988998-50024373 (-) noncoding (-0.008192)- 81 0.64 3
CNT30521188 Setaria italica III:13021119-13022721 (+) noncoding (-0.0114688)- 89 20.93 2
CNT30521187 Setaria italica III:23406464-23426637 (+) coding (0.099)0 (sp|O64937|EF1A_ORYSJ) 97 2.15 3Conserved counterparts:
CNT30521184 Setaria italica III:3377748-3380753 (-) coding (0.126)2e-79 (sp|P31155|METK1_PETCR) 94 10.16 2Conserved counterparts:
CNT30521183 Setaria italica III:44059682-44060505 (+) coding (0.266)- 77 343.8 2
CNT30521182 Setaria italica III:10746538-10747389 (+) noncoding (-0.0806912)2e-22 (sp|O65101|PSAH_MAIZE) 44 5.33 2