CNCI status: | # |
Max. peptide length: | # |
Is conserved: | # |
Organ specific: | # |
Max. expression: | # |
No. of exons: | # |
Order by: | lncRNA ID |
Record details | CANTATAdb ID | Species | Location | CNCI status (score) | Swiss-Prot best hit | Max. peptide length | Max. expression | No. of exons | Additional notes |
---|---|---|---|---|---|---|---|---|---|
CNT3098308 | Solanum tuberosum | 12:54225159-54234603 (-) | noncoding (-0.0540672) | 4e-66 (sp|P13046|PRR1_TOBAC) | 55 | 0 | 2 | ||
CNT3098307 | Solanum tuberosum | 12:974912-980510 (+) | noncoding (-0.073728) | - | 84 | 73.51 | 2 | ||
CNT3098306 | Solanum tuberosum | 12:20413745-20418896 (-) | noncoding (-0.036864) | - | 71 | 2.64 | 6 | ||
CNT3098305 | Solanum tuberosum | 12:30378569-30380939 (+) | noncoding (-0.0004096) | - | 59 | 5.6 | 2 | Expressed preferentially in seed | |
CNT3098304 | Solanum tuberosum | 12:14684005-14687062 (+) | noncoding (-0.0380928) | - | 46 | 0 | 5 | ||
CNT3098303 | Solanum tuberosum | 12:2714289-2715062 (-) | noncoding (-0.0004096) | 3e-22 (sp|Q9SU35|ERLL1_ARATH) | 48 | 0.13 | 3 | Expressed preferentially in seed | |
CNT3098302 | Solanum tuberosum | 12:53107393-53110572 (+) | noncoding (-0.0004096) | - | 49 | 5.62 | 5 | Conserved counterparts: CNT30511748 | |
CNT3098301 | Solanum tuberosum | 12:43742698-43745616 (+) | noncoding (-0.0688128) | - | 45 | 2.03 | 2 | Expressed preferentially in seed | |
CNT3098300 | Solanum tuberosum | 12:55683740-55702098 (-) | noncoding (-0.0004096) | - | 41 | 37.72 | 2 | ||
CNT3098299 | Solanum tuberosum | 12:2221574-2228396 (+) | noncoding (-0.0069632) | - | 72 | 5.27 | 5 | ||
CNT3098298 | Solanum tuberosum | 12:36145240-36154895 (-) | noncoding (-0.0802816) | - | 97 | 11.77 | 2 | ||
CNT3098297 | Solanum tuberosum | 12:1759739-1761862 (+) | noncoding (-0.024576) | 2e-18 (sp|Q6L439|R1A4_SOLDE) | 71 | 4.45 | 2 | ||
CNT3098296 | Solanum tuberosum | 12:14219404-14220007 (-) | noncoding (-0.098304) | - | 41 | 19.06 | 2 | ||
CNT3098295 | Solanum tuberosum | 12:40427120-40428677 (+) | noncoding (-0.0004096) | - | 89 | 10.07 | 2 | Expressed preferentially in seed | |
CNT3098293 | Solanum tuberosum | 12:44116501-44123519 (-) | noncoding (-0.012288) | - | 48 | 7.86 | 2 | ||
CNT3098292 | Solanum tuberosum | 12:20017251-20022112 (-) | noncoding (-0.06144) | - | 66 | 5.23 | 4 | ||
CNT3098290 | Solanum tuberosum | 12:59576458-59583253 (+) | noncoding (-0.0180224) | - | 39 | 1.5 | 3 | Conserved counterparts: CNT30511800 | |
CNT3098289 | Solanum tuberosum | 12:2221741-2228727 (+) | noncoding (-0.0069632) | - | 58 | 2.34 | 5 | ||
CNT3098288 | Solanum tuberosum | 12:2221936-2228479 (+) | noncoding (-0.0069632) | - | 72 | 4.95 | 6 | ||
CNT3098287 | Solanum tuberosum | 12:35997516-36029999 (-) | noncoding (-0.147456) | - | 33 | 6.53 | 5 | ||
CNT3098286 | Solanum tuberosum | 12:2221661-2228499 (+) | noncoding (-0.004096) | - | 43 | 4.9 | 6 | ||
CNT3098285 | Solanum tuberosum | 12:1685986-1762990 (+) | noncoding (-0.0004096) | - | 94 | 3.47 | 2 | ||
CNT3098284 | Solanum tuberosum | 12:59433818-59441846 (-) | noncoding (-0.0004096) | 3e-42 (sp|Q6L403|R1B17_SOLDE) | 36 | 3.94 | 2 | ||
CNT3098282 | Solanum tuberosum | 12:60228214-60229361 (-) | noncoding (-0.0004096) | 0.00000000000006 (sp|Q8GW48|HSBP_ARATH) | 61 | 6.29 | 2 | Conserved counterparts: CNT30511647 Expressed preferentially in seed |
|
CNT3098281 | Solanum tuberosum | 12:33883704-33890275 (+) | noncoding (-0.024576) | - | 48 | 5.54 | 4 | Expressed preferentially in seed | |
CNT3098280 | Solanum tuberosum | 12:55556302-55566096 (-) | noncoding (-0.026624) | - | 37 | 10.18 | 3 | ||
CNT3098279 | Solanum tuberosum | 12:60695123-60695701 (-) | noncoding (-0.0004096) | 4e-25 (sp|A0A1D6F5N5|LRR5_MAIZE) | - | 34.06 | 2 | ||
CNT3098278 | Solanum tuberosum | 12:8427779-8441036 (-) | noncoding (-0.086016) | - | 80 | 26.07 | 2 | ||
CNT3098277 | Solanum tuberosum | 12:55367966-55396430 (-) | noncoding (-0.02048) | 1e-52 (sp|Q9FZ96|PUP1_ARATH) | 42 | 4.52 | 3 | Expressed preferentially in seed | |
CNT3098276 | Solanum tuberosum | 12:57796942-57805003 (+) | coding (0.028) | 5e-149 (sp|Q40469|IF4A6_TOBAC) | 54 | 3.92 | 2 | Conserved counterparts: CNT30458374, CNT30511803 Expressed preferentially in seed |
|
CNT3098275 | Solanum tuberosum | 12:1730543-1757970 (+) | noncoding (-0.21504) | - | 38 | 4.05 | 2 | ||
CNT3098274 | Solanum tuberosum | 12:32728233-32728552 (+) | noncoding (-0.0004096) | - | 67 | 6.89 | 1 | ||
CNT3098273 | Solanum tuberosum | 12:55682378-55711362 (-) | noncoding (-0.0004096) | 7e-70 (sp|Q9FZ96|PUP1_ARATH) | 73 | 4.55 | 3 | ||
CNT3098272 | Solanum tuberosum | 12:27048743-27055219 (-) | noncoding (-0.0004096) | - | - | 365.96 | 2 | ||
CNT3098271 | Solanum tuberosum | 12:20410130-20418891 (-) | noncoding (-0.04096) | - | 63 | 6.65 | 9 | ||
CNT3098270 | Solanum tuberosum | 12:57326420-57329182 (-) | noncoding (-0.028672) | - | 47 | 60.38 | 1 | Expressed preferentially in seed | |
CNT3098269 | Solanum tuberosum | 12:3746803-3747171 (-) | noncoding (-0.024576) | 5e-25 (sp|Q42538|SAT5_ARATH) | - | 4.18 | 2 | ||
CNT3098268 | Solanum tuberosum | 12:60430568-60430943 (-) | noncoding (-0.0004096) | - | 40 | 40.23 | 2 | Expressed preferentially in seed | |
CNT3098267 | Solanum tuberosum | 12:1685152-1762467 (+) | noncoding (-0.0004096) | - | 37 | 4.42 | 3 | ||
CNT3098266 | Solanum tuberosum | 12:54549096-54554037 (+) | noncoding (-0.0004096) | - | 85 | 3.45 | 2 | Conserved counterparts: CNT30456384, CNT3081703, CNT30511787 | |
CNT3098265 | Solanum tuberosum | 12:14683980-14687172 (+) | noncoding (-0.0462848) | - | 96 | 2.6 | 7 | ||
CNT3098264 | Solanum tuberosum | 12:14683980-14687172 (+) | noncoding (-0.0380928) | - | 49 | 10.78 | 4 | ||
CNT3098263 | Solanum tuberosum | 12:30271315-30271826 (-) | noncoding (-0.0004096) | - | 49 | 1.15 | 2 | ||
CNT3098262 | Solanum tuberosum | 12:2992232-2992526 (-) | noncoding (-0.0004096) | - | - | 3.95 | 2 | ||
CNT3098261 | Solanum tuberosum | 12:29826337-29829922 (+) | noncoding (-0.0004096) | - | 37 | 3.91 | 3 | ||
CNT3098260 | Solanum tuberosum | 12:3067491-3067761 (-) | noncoding (-0.0053248) | - | - | 0 | 1 | ||
CNT3098259 | Solanum tuberosum | 12:3401066-3443534 (-) | noncoding (-0.032768) | - | 51 | 9.91 | 2 | Expressed preferentially in seed | |
CNT3098258 | Solanum tuberosum | 12:61039873-61040463 (+) | noncoding (-0.077824) | - | 53 | 3.6 | 2 | Conserved counterparts: CNT30511910 | |
CNT3098257 | Solanum tuberosum | 12:14684060-14687132 (+) | noncoding (-0.0028672) | - | 46 | 6.53 | 5 | ||
CNT3098256 | Solanum tuberosum | 12:21235949-21250692 (+) | noncoding (-0.045056) | - | 82 | 17.68 | 2 |