SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 2986 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Additional notes
CNT30577335 Oryza barthii 8:639382-642863 (+) coding (0.442)- 71 6.75 2Conserved counterparts: CNT30604448
CNT30577334 Oryza barthii 8:19876739-19877696 (+) noncoding (-0.0028672)- 57 0.99 2
CNT30577333 Oryza barthii 8:22566292-22567335 (-) noncoding (-0.0425984)- 62 8.09 2
CNT30577331 Oryza barthii 8:8073971-8077947 (+) noncoding (-0.08192)- 67 1.13 2
CNT30577330 Oryza barthii 8:2093467-2099236 (-) noncoding (-0.016384)- 51 30.94 3Conserved counterparts: CNT30596433, CNT30103585
Expressed preferentially in leaf
CNT30577329 Oryza barthii 8:21418494-21418975 (+) coding (0.083)- 30 3.85 1
CNT30577328 Oryza barthii 8:21929883-21932506 (-) noncoding (-0.0028672)- 68 4.07 3Conserved counterparts: CNT30523412
CNT30577327 Oryza barthii 8:12498461-12499690 (-) noncoding (-0.0004096)- 43 4.39 2
CNT30577326 Oryza barthii 8:4272153-4272450 (+) noncoding (-0.0004096)- 39 7.75 1
CNT30577325 Oryza barthii 8:18751491-18752881 (+) noncoding (-0.126976)- 88 6.28 1
CNT30577324 Oryza barthii 8:15470406-15471675 (-) noncoding (-0.036864)- - 2.34 2Conserved counterparts: CNT30117498, CNT30103130
CNT30577323 Oryza barthii 8:22617331-22618288 (-) coding (0.252)1e-100 (sp|Q9M8Y5|LTL1_ARATH) 67 1.1 3Conserved counterparts: CNT30103205
CNT30577322 Oryza barthii 8:630173-631104 (+) noncoding (-0.0004096)- 48 0.5 2
CNT30577321 Oryza barthii 8:19465243-19466710 (+) coding (0.159)4e-19 (sp|P84187|SGAT_MAIZE) 77 8.97 3Conserved counterparts: CNT30468729, CNT30596755, CNT30117285, CNT30604430, CNT30695377
Expressed preferentially in leaf
CNT30577320 Oryza barthii 8:2032419-2032852 (-) noncoding (-0.0344064)- 63 4.65 1
CNT30577319 Oryza barthii 8:18326020-18327279 (+) noncoding (-0.0004096)- 50 8.84 3
CNT30577318 Oryza barthii 8:18926027-18926719 (-) noncoding (-0.0958464)- 34 137.26 2Conserved counterparts: CNT30117418, CNT30102816, CNT30695540
CNT30577317 Oryza barthii 8:1868379-1870096 (+) coding (0.293)- 91 17.37 1
CNT30577316 Oryza barthii 8:7901372-7903802 (+) noncoding (-0.150323)- 89 7.86 2Conserved counterparts: CNT30117724, CNT30696762
CNT30577315 Oryza barthii 8:2553394-2553741 (+) noncoding (-0.0237568)- 36 244.81 1Conserved counterparts: CNT30102986, CNT30642617
CNT30577313 Oryza barthii 8:22497825-22499551 (+) noncoding (-0.04096)- 95 6.45 2
CNT30577312 Oryza barthii 8:10883313-10884766 (+) noncoding (-0.0196608)- 97 4.01 2Conserved counterparts: CNT30595638
CNT30577311 Oryza barthii 8:6815963-6816705 (-) coding (0.174)- 83 167.15 2Conserved counterparts: CNT30103020
CNT30577310 Oryza barthii 8:10244365-10254464 (+) noncoding (-0.0004096)- - 19.33 2Conserved counterparts: CNT30696277
CNT30577309 Oryza barthii 8:18327722-18329623 (+) noncoding (-0.0827392)- 54 1001.07 2Conserved counterparts: CNT30142453, CNT30711, CNT30695440
CNT30577308 Oryza barthii 8:21333669-21336332 (-) noncoding (-0.06144)- 85 3.38 2
CNT30577306 Oryza barthii 8:1394895-1397562 (-) noncoding (-0.0004096)- 81 4.05 2
CNT30577305 Oryza barthii 8:16194233-16195639 (+) coding (0.12)8e-33 (sp|Q9SQL2|CB24_PEA) 85 1190.11 2Conserved counterparts: CNT30138628, CNT30117373, CNT30604463, CNT30102835, CNT30695524
Expressed preferentially in leaf
CNT30577304 Oryza barthii 8:14877071-14878352 (+) noncoding (-0.053248)- 88 15.3 2
CNT30577303 Oryza barthii 8:16458818-16459196 (+) noncoding (-0.208896)- 50 27.02 1
CNT30577302 Oryza barthii 8:7444885-7445382 (-) noncoding (-0.135168)- 30 15.34 2Conserved counterparts: CNT30104114
CNT30577300 Oryza barthii 8:16917069-16923163 (-) noncoding (-0.0262144)- 64 1.46 6Conserved counterparts: CNT30115778
CNT30577299 Oryza barthii 8:12403444-12410249 (-) noncoding (-0.0479232)1e-26 (sp|P10978|POLX_TOBAC) 80 14.3 2Conserved counterparts: CNT30695639
CNT30577296 Oryza barthii 8:7882177-7885977 (-) coding (0.234)- 89 5.96 4
CNT30577295 Oryza barthii 8:11178544-11178927 (+) noncoding (-0.172032)- 52 6.79 2
CNT30577294 Oryza barthii 8:2843127-2843782 (-) noncoding (-0.0004096)- 55 18.97 2Expressed preferentially in leaf
CNT30577293 Oryza barthii 8:22002255-22003363 (-) noncoding (-0.0282624)- 52 3.07 2
CNT30577292 Oryza barthii 8:16194233-16195639 (+) noncoding (-0.0356352)- 85 1157.86 2Conserved counterparts: CNT30138628, CNT30596737, CNT30117373, CNT30604528, CNT30102863, CNT30695632
Expressed preferentially in leaf
CNT30577290 Oryza barthii 8:1033127-1033955 (+) coding (0.108)- 48 151.6 2Conserved counterparts: CNT30604429, CNT30103198
Expressed preferentially in leaf
CNT30577289 Oryza barthii 8:16917209-16923131 (-) noncoding (-0.01024)- 53 1.39 6Conserved counterparts: CNT30115470
CNT30577287 Oryza barthii 8:2093467-2099126 (-) noncoding (-0.016384)- 52 2.94 4Conserved counterparts: CNT30596433, CNT30103585
Expressed preferentially in leaf
CNT30577285 Oryza barthii 8:4929872-4935456 (+) noncoding (-0.0380928)- 83 2.32 3
CNT30577284 Oryza barthii 8:11547818-11548750 (-) coding (0.25)- 40 11.91 1
CNT30577282 Oryza barthii 8:20277752-20278506 (-) noncoding (-0.208896)- 63 21.94 2
CNT30577280 Oryza barthii 8:8450666-8451680 (+) noncoding (-0.0151552)- 56 14.29 1Expressed preferentially in leaf
CNT30577279 Oryza barthii 8:2890345-2891676 (+) coding (0.368)1e-169 (sp|Q84UP7|CSLF6_ORYSJ) 57 0.85 3
CNT30577276 Oryza barthii 8:14576609-14577113 (+) noncoding (-0.121242)- 73 2.96 1
CNT30577275 Oryza barthii 8:8465601-8467501 (-) NA (0)- 87 0.76 1Conserved counterparts: CNT30693563
CNT30577273 Oryza barthii 8:13255360-13255900 (-) noncoding (-0.032768)- 37 3.25 2
CNT30577272 Oryza barthii 8:22092955-22110112 (-) NA (0)0 (sp|Q9C5N2|TMN9_ARATH) 53 57.56 2Conserved counterparts: CNT30469220, CNT30102948, CNT30695235