CNCI status: | # |
Max. peptide length: | # |
Is conserved: | # |
Organ specific: | # |
Max. expression: | # |
No. of exons: | # |
Order by: | lncRNA ID |
Record details | CANTATAdb ID | Species | Location | CNCI status (score) | Swiss-Prot best hit | Max. peptide length | Max. expression | No. of exons | Additional notes |
---|---|---|---|---|---|---|---|---|---|
CNT30523203 | Setaria italica | V:36433499-36461163 (-) | coding (0.253) | 0.00000002 (sp|Q8LPB4|PSKR1_DAUCA) | 81 | 1.94 | 2 | ||
CNT30523201 | Setaria italica | V:5153214-5153591 (+) | noncoding (-0.032768) | - | 77 | 0.61 | 2 | ||
CNT30523200 | Setaria italica | V:10787865-10788139 (+) | noncoding (-0.114688) | 0.00000002 (sp|Q767C8|IH5GT_IRIHO) | 55 | 0 | 2 | Expressed preferentially in root | |
CNT30523197 | Setaria italica | V:26247212-26250058 (-) | noncoding (-0.032768) | - | 79 | 6.36 | 2 | Conserved counterparts: CNT3015360 Expressed preferentially in root |
|
CNT30523196 | Setaria italica | V:32436137-32436485 (+) | coding (0.611) | - | 94 | 0 | 2 | ||
CNT30523193 | Setaria italica | V:37527041-37527577 (+) | coding (0.179) | - | 86 | 10.22 | 2 | ||
CNT30523192 | Setaria italica | V:5817317-5818322 (+) | coding (0.023) | - | 72 | 68.85 | 2 | Conserved counterparts: CNT30457571 Expressed preferentially in leaf |
|
CNT30523191 | Setaria italica | V:2252157-2252664 (-) | noncoding (-0.049152) | - | 35 | 9.43 | 2 | ||
CNT30523188 | Setaria italica | V:30644051-30645054 (-) | noncoding (-0.0442368) | - | 55 | 153.73 | 1 | Expressed preferentially in leaf | |
CNT30523187 | Setaria italica | V:36315210-36316032 (+) | coding (0.197) | 0.00000004 (sp|Q9LVB9|OXS3_ARATH) | 91 | 139.5 | 2 | Expressed preferentially in root | |
CNT30523186 | Setaria italica | V:27334744-27336133 (+) | coding (0.37) | 7e-129 (sp|Q9LNJ3|APF2_ARATH) | 42 | 0.08 | 3 | ||
CNT30523184 | Setaria italica | V:1685096-1693914 (+) | coding (0.133) | - | 46 | 10.79 | 3 | ||
CNT30523181 | Setaria italica | V:6910322-6910877 (-) | noncoding (-0.073728) | 3e-33 (sp|P69310|UBIQ_AVESA) | 78 | 9.34 | 2 | Conserved counterparts: CNT30228911, CNT30141434, CNT30528977, CNT30458211, CNT30576634 | |
CNT30523180 | Setaria italica | V:251738-252200 (-) | noncoding (-0.100762) | - | 34 | 2.09 | 2 | Expressed preferentially in leaf | |
CNT30523179 | Setaria italica | V:22299575-22300335 (+) | noncoding (-0.0090112) | - | 46 | 6.94 | 2 | ||
CNT30523178 | Setaria italica | V:33901611-33902320 (-) | noncoding (-0.0004096) | - | 46 | 0.68 | 1 | ||
CNT30523177 | Setaria italica | V:27562227-27567398 (+) | noncoding (-0.0147456) | - | 84 | 18.85 | 3 | ||
CNT30523176 | Setaria italica | V:41119722-41120401 (-) | noncoding (-0.0364544) | - | 79 | 1.54 | 2 | ||
CNT30523174 | Setaria italica | V:10787547-10788261 (+) | coding (0.537) | - | 80 | 64.68 | 2 | Expressed preferentially in root | |
CNT30523172 | Setaria italica | V:14113543-14114219 (+) | coding (0.162) | 3e-57 (sp|Q9ARZ9|R27AA_ORYSJ) | 50 | 5.57 | 2 | Conserved counterparts: CNT30142281, CNT30459266, CNT30575387, CNT30595657, CNT30115854, CNT30603673, CNT30100520 Expressed preferentially in root |
|
CNT30523170 | Setaria italica | V:43099982-43100407 (+) | noncoding (-0.226099) | 4e-34 (sp|Q9LVM2|NDHN_ARATH) | 89 | 138.39 | 2 | Expressed preferentially in root | |
CNT30523168 | Setaria italica | V:36907125-36907549 (+) | noncoding (-0.049152) | - | 84 | 1.45 | 2 | ||
CNT30523167 | Setaria italica | V:11687364-11688319 (+) | noncoding (-0.014336) | - | 71 | 25.42 | 3 | Expressed preferentially in leaf | |
CNT30523166 | Setaria italica | V:10051207-10051582 (+) | noncoding (-0.07168) | - | 94 | 0 | 2 | ||
CNT30523165 | Setaria italica | V:29693986-29694595 (-) | coding (0.18) | - | 71 | 2.39 | 1 | Expressed preferentially in root | |
CNT30523164 | Setaria italica | V:11858772-11860271 (-) | coding (0.127) | - | 89 | 5.89 | 2 | ||
CNT30523163 | Setaria italica | V:47090788-47091817 (+) | coding (0.321) | - | 93 | 0.2 | 3 | Conserved counterparts: CNT30690451 | |
CNT30523160 | Setaria italica | V:22909310-22910368 (+) | noncoding (-0.069632) | 4e-30 (sp|B8B6I2|GLO18_ORYSI) | 80 | 18.36 | 2 | Expressed preferentially in root | |
CNT30523159 | Setaria italica | V:43674081-43674853 (+) | coding (0.413) | - | 41 | 0.52 | 3 | ||
CNT30523158 | Setaria italica | V:16267559-16268675 (+) | noncoding (-0.090112) | - | 55 | 1.56 | 3 | ||
CNT30523155 | Setaria italica | V:39415127-39415402 (+) | noncoding (-0.332595) | - | 74 | 3.85 | 2 | Expressed preferentially in root | |
CNT30523154 | Setaria italica | V:20791912-20792289 (+) | noncoding (-0.121651) | 0.0000002 (sp|P85955|DRE1_PSEMZ) | 87 | 0.46 | 2 | ||
CNT30523152 | Setaria italica | V:6594847-6598450 (+) | noncoding (-0.0303104) | - | 85 | 5.84 | 2 | Expressed preferentially in root | |
CNT30523149 | Setaria italica | V:22909329-22910368 (+) | coding (0.167) | 3e-46 (sp|F4JLZ6|SMO13_ARATH) | 65 | 1.23 | 2 | Expressed preferentially in root | |
CNT30523147 | Setaria italica | V:7313652-7314124 (-) | noncoding (-0.0290816) | 2e-33 (sp|P19860|IBB2_SETIT) | 68 | 26.77 | 2 | Expressed preferentially in stem | |
CNT30523146 | Setaria italica | V:15360629-15362696 (+) | coding (0.242) | - | 63 | 6.31 | 1 | ||
CNT30523145 | Setaria italica | V:22435029-22435649 (-) | noncoding (-0.008192) | - | 64 | 1.65 | 2 | ||
CNT30523142 | Setaria italica | V:31832633-31833409 (-) | noncoding (-0.0659456) | 1e-39 (sp|P49120|H2B4_MAIZE) | 34 | 1.54 | 2 | Conserved counterparts: CNT30231835, CNT30136307, CNT30455629, CNT30576366, CNT30693619 Expressed preferentially in root |
|
CNT30523136 | Setaria italica | V:35334344-35334720 (+) | noncoding (-0.12247) | 1e-22 (sp|Q942F3|BRI1_ORYSJ) | 98 | 0 | 2 | Conserved counterparts: CNT3099747 | |
CNT30523134 | Setaria italica | V:41033547-41033766 (-) | noncoding (-0.0004096) | - | - | 0 | 1 | ||
CNT30523133 | Setaria italica | V:22909328-22910368 (+) | coding (0.148) | 2e-47 (sp|F4JLZ6|SMO13_ARATH) | 65 | 1.49 | 2 | Expressed preferentially in root | |
CNT30523132 | Setaria italica | V:9079706-9080407 (+) | noncoding (-0.0417792) | 6e-23 (sp|P49120|H2B4_MAIZE) | 61 | 0.96 | 2 | Conserved counterparts: CNT30451774, CNT30574682, CNT3015998, CNT30690391 | |
CNT30523131 | Setaria italica | V:35283787-35284008 (-) | noncoding (-0.231834) | - | 73 | 4.6 | 1 | ||
CNT30523129 | Setaria italica | V:33355134-33355632 (-) | coding (0.299) | - | 85 | 0.23 | 2 | ||
CNT30523125 | Setaria italica | V:22356770-22358801 (+) | noncoding (-0.028672) | - | 76 | 3.79 | 4 | ||
CNT30523124 | Setaria italica | V:2331747-2333959 (+) | coding (0.108) | - | 61 | 2.14 | 2 | ||
CNT30523123 | Setaria italica | V:35081399-35084133 (-) | noncoding (-0.032768) | - | 71 | 10.89 | 2 | ||
CNT30523122 | Setaria italica | V:31607190-31607559 (-) | coding (0.704) | - | 93 | 1.64 | 2 | Conserved counterparts: CNT3099756 Expressed preferentially in stem |
|
CNT30523121 | Setaria italica | V:11695993-11696802 (-) | noncoding (-0.110592) | - | 44 | 13.11 | 1 | Expressed preferentially in root | |
CNT30523114 | Setaria italica | V:9651736-9652499 (-) | noncoding (-0.0700416) | - | 75 | 1.74 | 3 |