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lncRNA id
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Found 2749 records

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Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Additional notes
CNT30523203 Setaria italica V:36433499-36461163 (-) coding (0.253)0.00000002 (sp|Q8LPB4|PSKR1_DAUCA) 81 1.94 2
CNT30523201 Setaria italica V:5153214-5153591 (+) noncoding (-0.032768)- 77 0.61 2
CNT30523200 Setaria italica V:10787865-10788139 (+) noncoding (-0.114688)0.00000002 (sp|Q767C8|IH5GT_IRIHO) 55 0 2Expressed preferentially in root
CNT30523197 Setaria italica V:26247212-26250058 (-) noncoding (-0.032768)- 79 6.36 2Conserved counterparts: CNT3015360
Expressed preferentially in root
CNT30523196 Setaria italica V:32436137-32436485 (+) coding (0.611)- 94 0 2
CNT30523193 Setaria italica V:37527041-37527577 (+) coding (0.179)- 86 10.22 2
CNT30523192 Setaria italica V:5817317-5818322 (+) coding (0.023)- 72 68.85 2Conserved counterparts: CNT30457571
Expressed preferentially in leaf
CNT30523191 Setaria italica V:2252157-2252664 (-) noncoding (-0.049152)- 35 9.43 2
CNT30523188 Setaria italica V:30644051-30645054 (-) noncoding (-0.0442368)- 55 153.73 1Expressed preferentially in leaf
CNT30523187 Setaria italica V:36315210-36316032 (+) coding (0.197)0.00000004 (sp|Q9LVB9|OXS3_ARATH) 91 139.5 2Expressed preferentially in root
CNT30523186 Setaria italica V:27334744-27336133 (+) coding (0.37)7e-129 (sp|Q9LNJ3|APF2_ARATH) 42 0.08 3
CNT30523184 Setaria italica V:1685096-1693914 (+) coding (0.133)- 46 10.79 3
CNT30523181 Setaria italica V:6910322-6910877 (-) noncoding (-0.073728)3e-33 (sp|P69310|UBIQ_AVESA) 78 9.34 2Conserved counterparts: CNT30228911, CNT30141434, CNT30528977, CNT30458211, CNT30576634
CNT30523180 Setaria italica V:251738-252200 (-) noncoding (-0.100762)- 34 2.09 2Expressed preferentially in leaf
CNT30523179 Setaria italica V:22299575-22300335 (+) noncoding (-0.0090112)- 46 6.94 2
CNT30523178 Setaria italica V:33901611-33902320 (-) noncoding (-0.0004096)- 46 0.68 1
CNT30523177 Setaria italica V:27562227-27567398 (+) noncoding (-0.0147456)- 84 18.85 3
CNT30523176 Setaria italica V:41119722-41120401 (-) noncoding (-0.0364544)- 79 1.54 2
CNT30523174 Setaria italica V:10787547-10788261 (+) coding (0.537)- 80 64.68 2Expressed preferentially in root
CNT30523172 Setaria italica V:14113543-14114219 (+) coding (0.162)3e-57 (sp|Q9ARZ9|R27AA_ORYSJ) 50 5.57 2Conserved counterparts: CNT30142281, CNT30459266, CNT30575387, CNT30595657, CNT30115854, CNT30603673, CNT30100520
Expressed preferentially in root
CNT30523170 Setaria italica V:43099982-43100407 (+) noncoding (-0.226099)4e-34 (sp|Q9LVM2|NDHN_ARATH) 89 138.39 2Expressed preferentially in root
CNT30523168 Setaria italica V:36907125-36907549 (+) noncoding (-0.049152)- 84 1.45 2
CNT30523167 Setaria italica V:11687364-11688319 (+) noncoding (-0.014336)- 71 25.42 3Expressed preferentially in leaf
CNT30523166 Setaria italica V:10051207-10051582 (+) noncoding (-0.07168)- 94 0 2
CNT30523165 Setaria italica V:29693986-29694595 (-) coding (0.18)- 71 2.39 1Expressed preferentially in root
CNT30523164 Setaria italica V:11858772-11860271 (-) coding (0.127)- 89 5.89 2
CNT30523163 Setaria italica V:47090788-47091817 (+) coding (0.321)- 93 0.2 3Conserved counterparts: CNT30690451
CNT30523160 Setaria italica V:22909310-22910368 (+) noncoding (-0.069632)4e-30 (sp|B8B6I2|GLO18_ORYSI) 80 18.36 2Expressed preferentially in root
CNT30523159 Setaria italica V:43674081-43674853 (+) coding (0.413)- 41 0.52 3
CNT30523158 Setaria italica V:16267559-16268675 (+) noncoding (-0.090112)- 55 1.56 3
CNT30523155 Setaria italica V:39415127-39415402 (+) noncoding (-0.332595)- 74 3.85 2Expressed preferentially in root
CNT30523154 Setaria italica V:20791912-20792289 (+) noncoding (-0.121651)0.0000002 (sp|P85955|DRE1_PSEMZ) 87 0.46 2
CNT30523152 Setaria italica V:6594847-6598450 (+) noncoding (-0.0303104)- 85 5.84 2Expressed preferentially in root
CNT30523149 Setaria italica V:22909329-22910368 (+) coding (0.167)3e-46 (sp|F4JLZ6|SMO13_ARATH) 65 1.23 2Expressed preferentially in root
CNT30523147 Setaria italica V:7313652-7314124 (-) noncoding (-0.0290816)2e-33 (sp|P19860|IBB2_SETIT) 68 26.77 2Expressed preferentially in stem
CNT30523146 Setaria italica V:15360629-15362696 (+) coding (0.242)- 63 6.31 1
CNT30523145 Setaria italica V:22435029-22435649 (-) noncoding (-0.008192)- 64 1.65 2
CNT30523142 Setaria italica V:31832633-31833409 (-) noncoding (-0.0659456)1e-39 (sp|P49120|H2B4_MAIZE) 34 1.54 2Conserved counterparts: CNT30231835, CNT30136307, CNT30455629, CNT30576366, CNT30693619
Expressed preferentially in root
CNT30523136 Setaria italica V:35334344-35334720 (+) noncoding (-0.12247)1e-22 (sp|Q942F3|BRI1_ORYSJ) 98 0 2Conserved counterparts: CNT3099747
CNT30523134 Setaria italica V:41033547-41033766 (-) noncoding (-0.0004096)- - 0 1
CNT30523133 Setaria italica V:22909328-22910368 (+) coding (0.148)2e-47 (sp|F4JLZ6|SMO13_ARATH) 65 1.49 2Expressed preferentially in root
CNT30523132 Setaria italica V:9079706-9080407 (+) noncoding (-0.0417792)6e-23 (sp|P49120|H2B4_MAIZE) 61 0.96 2Conserved counterparts: CNT30451774, CNT30574682, CNT3015998, CNT30690391
CNT30523131 Setaria italica V:35283787-35284008 (-) noncoding (-0.231834)- 73 4.6 1
CNT30523129 Setaria italica V:33355134-33355632 (-) coding (0.299)- 85 0.23 2
CNT30523125 Setaria italica V:22356770-22358801 (+) noncoding (-0.028672)- 76 3.79 4
CNT30523124 Setaria italica V:2331747-2333959 (+) coding (0.108)- 61 2.14 2
CNT30523123 Setaria italica V:35081399-35084133 (-) noncoding (-0.032768)- 71 10.89 2
CNT30523122 Setaria italica V:31607190-31607559 (-) coding (0.704)- 93 1.64 2Conserved counterparts: CNT3099756
Expressed preferentially in stem
CNT30523121 Setaria italica V:11695993-11696802 (-) noncoding (-0.110592)- 44 13.11 1Expressed preferentially in root
CNT30523114 Setaria italica V:9651736-9652499 (-) noncoding (-0.0700416)- 75 1.74 3