SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 2749 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30523370 Setaria italica VI:3243838-3251426 (+) noncoding (-0.0004096)- 76 0 2Conserved counterparts:
CNT30523367 Setaria italica VI:1696103-1699118 (+) noncoding (-0.02048)- 59 5.49 2
CNT30523366 Setaria italica VI:1692658-1702269 (+) noncoding (-0.0212992)- 84 27.16 2
CNT30523362 Setaria italica VI:3242841-3249977 (-) noncoding (-0.024576)- 87 15.13 2Conserved counterparts:
CNT30523361 Setaria italica VI:24062571-24201612 (-) coding (0.037)4e-21 (sp|P01540|THNA_PHOLI) 41 3.21 5
CNT30523360 Setaria italica VI:6351068-6438357 (+) noncoding (-0.0004096)0.000000000000004 (sp|Q9SVN2|RLP47_ARATH) 47 0 2
CNT30523359 Setaria italica VI:451988-453199 (-) noncoding (-0.0344064)- 61 15.7 2
CNT30523356 Setaria italica VI:9670179-9674934 (-) noncoding (-0.057344)- 100 4.81 2
CNT30523353 Setaria italica VI:35229618-35230205 (+) coding (0.235)- 88 2.17 2
CNT30523350 Setaria italica VI:393907-394464 (+) noncoding (-0.0258048)2e-25 (sp|P27787|FER1_MAIZE) 30 0.63 2Conserved counterparts:
CNT30523349 Setaria italica VI:34685747-34686223 (+) coding (0.296)- 91 10.46 2
CNT30523344 Setaria italica VI:4433301-4439024 (+) noncoding (-0.012288)2e-54 (sp|A0A0P0XBU0|CCA1_ORYSJ) 64 79.6 3
CNT30523342 Setaria italica VI:24062660-24121475 (-) coding (0.047)4e-21 (sp|P01540|THNA_PHOLI) 38 7.65 3
CNT30523340 Setaria italica VI:7978780-7979516 (-) coding (0.306)- 43 0 2Conserved counterparts:
CNT30523339 Setaria italica VI:9692075-9693791 (-) noncoding (-0.0004096)0.0000000006 (sp|Q9SJA4|CNG14_ARATH) 39 6.15 2
CNT30523337 Setaria italica VI:2148900-2152863 (-) noncoding (-0.0602112)- 94 2.55 2
CNT30523335 Setaria italica VI:33807624-33809807 (-) noncoding (-0.036864)- 46 28.76 2
CNT30523333 Setaria italica VI:29142682-29142954 (+) noncoding (-0.0004096)- 57 303.53 1
CNT30523329 Setaria italica VI:17182955-17183362 (-) noncoding (-0.0086016)- 65 24.29 1
CNT30523327 Setaria italica VI:23499775-23500767 (+) coding (0.19)- 66 3.37 2
CNT30523325 Setaria italica VI:389623-394583 (+) coding (0.279)9e-43 (sp|P27787|FER1_MAIZE) - 2.72 2Conserved counterparts:
CNT30523324 Setaria italica VI:31542832-31543756 (+) coding (0.107)- 82 2.05 2
CNT30523322 Setaria italica VI:32963546-32964492 (-) noncoding (-0.053248)1e-65 (sp|Q6YZW0|ARFU_ORYSJ) 82 1.21 2Conserved counterparts:
CNT30523321 Setaria italica VI:4432451-4433031 (+) coding (0.2)6e-42 (sp|A0A0P0XBU0|CCA1_ORYSJ) 92 0.09 2
CNT30523320 Setaria italica VI:24063221-24158216 (-) noncoding (-0.06144)- 33 9.53 4
CNT30523318 Setaria italica VI:24062571-24121466 (-) coding (0.037)3e-20 (sp|P01540|THNA_PHOLI) 41 0.71 3
CNT30523317 Setaria italica VI:6350467-6438010 (+) noncoding (-0.098304)7e-40 (sp|O48851|RLP22_ARATH) 70 0.21 2
CNT30523316 Setaria italica VI:17247832-17248324 (-) noncoding (-0.114688)- 57 16.82 2
CNT30523315 Setaria italica VI:31986889-31993246 (+) coding (0.215)0.0000009 (sp|Q9FG77|WRKY2_ARATH) 84 1.22 5
CNT30523314 Setaria italica VI:29642950-29643811 (+) noncoding (-0.0524288)- 89 3.23 1
CNT30523311 Setaria italica VI:34528879-34537730 (+) noncoding (-0.155648)2e-20 (sp|Q9LRR4|R13L1_ARATH) 85 2.05 2
CNT30523310 Setaria italica VI:24062676-24201707 (-) noncoding (-0.02048)3e-21 (sp|P01540|THNA_PHOLI) 56 0.14 4
CNT30523309 Setaria italica VI:28094361-28095552 (-) coding (0.245)3e-88 (sp|P27521|CA4_ARATH) 84 62.46 2Conserved counterparts:
CNT30523307 Setaria italica VI:24063180-24158185 (-) noncoding (-0.04096)- 33 0.18 3
CNT30523306 Setaria italica VI:34271775-34278886 (+) noncoding (-0.06144)0.0000000004 (sp|Q7XBQ9|RGA2_SOLBU) 72 0.67 2
CNT30523303 Setaria italica VI:33306595-33307076 (+) coding (0.155)- 55 0.63 2
CNT30523301 Setaria italica VI:35203078-35203582 (+) noncoding (-0.0733184)- 68 0 2
CNT30523300 Setaria italica VI:1704352-1709666 (-) coding (0.55)- 86 121.13 2Conserved counterparts:
CNT30523299 Setaria italica VI:24121833-24202420 (-) noncoding (-0.0004096)- 33 0.33 3
CNT30523297 Setaria italica VI:4431841-4432880 (+) noncoding (-0.0622592)- 49 9.41 2
CNT30523296 Setaria italica VI:32064853-32085463 (+) noncoding (-0.0311296)9e-50 (sp|Q69QQ6|HSP82_ORYSJ) 83 14.3 3Conserved counterparts:
CNT30523295 Setaria italica VI:4464251-4494557 (-) coding (0.347)2e-135 (sp|O82054|COMT1_SACOF) 84 1.19 3
CNT30523293 Setaria italica VI:5130827-5131389 (+) coding (0.02)- 87 4.38 2
CNT30523292 Setaria italica VI:2396100-2397267 (+) noncoding (-0.0008192)- 83 3.03 2Conserved counterparts:
CNT30523291 Setaria italica VI:6980407-6980822 (+) noncoding (-0.0114688)- 54 82.39 1
CNT30523290 Setaria italica VI:30238798-30239345 (-) coding (0.289)4e-53 (sp|P16081|NIA1_ORYSJ) 60 2.51 2
CNT30523286 Setaria italica VI:1690405-1700563 (+) noncoding (-0.08192)2e-52 (sp|F7J0N2|RGA5R_ORYSJ) 68 5.41 2
CNT30523285 Setaria italica VI:9126851-9128914 (-) noncoding (-0.200704)- 73 17.85 3
CNT30523284 Setaria italica VI:22168526-22174475 (+) noncoding (-0.0004096)- 42 0 2
CNT30523282 Setaria italica VI:24079576-24201707 (-) noncoding (-0.02048)2e-21 (sp|P01540|THNA_PHOLI) 56 7.71 4