SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 4376 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Additional notes
CNT30573903 Vitis vinifera 18:5649357-5649783 (-) noncoding (-0.0004096)- 34 12.76 1
CNT30573902 Vitis vinifera 18:9056177-9056721 (-) noncoding (-0.129434)5e-42 (sp|Q9SX78|CXE2_ARATH) 72 0.99 2
CNT30573901 Vitis vinifera 18:4023388-4023653 (+) noncoding (-0.1024)0.00000000000001 (sp|P53393|SUT3_STYHA) 31 8.56 1
CNT30573900 Vitis vinifera 18:12723977-12724905 (+) noncoding (-0.0405504)- 49 2.29 2
CNT30573899 Vitis vinifera 18:14191230-14192545 (-) noncoding (-0.221184)- 37 6.05 2Expressed preferentially in root
CNT30573898 Vitis vinifera 18:10403357-10404151 (-) noncoding (-0.073728)- 81 3.27 2Expressed preferentially in root
CNT30573897 Vitis vinifera 18:27431155-27431700 (-) noncoding (-0.090112)0.00000000001 (sp|V9M398|RUN1_VITRO) 59 67.28 2
CNT30573896 Vitis vinifera 18:20201163-20203556 (+) noncoding (-0.036864)- 74 13.31 2
CNT30573895 Vitis vinifera 18:14078471-14080218 (+) noncoding (-0.049152)0.00000001 (sp|Q9T0I5|PRP4_ARATH) 62 2435.28 3Expressed preferentially in root
CNT30573894 Vitis vinifera 18:31079626-31081655 (+) noncoding (-0.0053248)- 47 2.63 3
CNT30573893 Vitis vinifera 18:13971377-13973375 (+) noncoding (-0.0004096)- 60 5.56 1
CNT30573892 Vitis vinifera 18:16608390-16609176 (+) noncoding (-0.047104)- 31 16.23 2
CNT30573891 Vitis vinifera 18:27428419-27428959 (-) noncoding (-0.004096)1e-60 (sp|V9M2S5|RPV1_VITRO) 54 41.28 1
CNT30573890 Vitis vinifera 18:8620272-8634768 (-) noncoding (-0.053248)3e-76 (sp|O82777|SBT3_SOLLC) 75 0.79 2
CNT30573889 Vitis vinifera 18:4713977-4714984 (-) coding (0.126)2e-66 (sp|P46266|1433_PEA) 86 9.54 3Conserved counterparts: CNT30711309
Expressed preferentially in root
CNT30573888 Vitis vinifera 18:33800503-33809483 (-) noncoding (-0.06144)- 71 4.93 5Conserved counterparts: CNT30376083
CNT30573887 Vitis vinifera 18:5464006-5465658 (-) noncoding (-0.012288)- 57 11.18 5Expressed preferentially in root
CNT30573886 Vitis vinifera 18:30183354-30184867 (-) noncoding (-0.004096)1e-55 (sp|V9M2S5|RPV1_VITRO) 73 32.47 1
CNT30573885 Vitis vinifera 18:10798652-10799655 (-) noncoding (-0.036864)- 59 26.71 2
CNT30573884 Vitis vinifera 18:9762572-9778787 (-) noncoding (-0.0090112)5e-33 (sp|O49858|C82A3_SOYBN) 58 5.86 2
CNT30573883 Vitis vinifera 18:14346787-14350711 (-) noncoding (-0.004096)- 89 5.67 4Expressed preferentially in root
CNT30573881 Vitis vinifera 18:27301451-27302450 (-) noncoding (-0.139264)- 58 4.4 2
CNT30573880 Vitis vinifera 18:22924379-22924742 (+) noncoding (-0.0118784)6e-43 (sp|Q9ZP59|TLP1_ARATH) 88 0 2
CNT30573879 Vitis vinifera 18:12723977-12724951 (+) noncoding (-0.0557056)- 49 14.35 2
CNT30573878 Vitis vinifera 18:25156599-25175780 (+) noncoding (-0.0004096)1e-63 (sp|Q9FY79|LAC14_ARATH) 45 0.92 2
CNT30573877 Vitis vinifera 18:10499125-10499518 (+) noncoding (-0.0004096)- - 26.14 1Expressed preferentially in root
CNT30573876 Vitis vinifera 18:9006790-9007778 (+) noncoding (-0.0004096)- 46 16.53 2
CNT30573875 Vitis vinifera 18:4528065-4529105 (-) noncoding (-0.0131072)4e-29 (sp|P10978|POLX_TOBAC) 30 47.55 2Expressed preferentially in fruit
CNT30573874 Vitis vinifera 18:6334494-6357572 (-) noncoding (-0.086016)- 78 1.08 6Expressed preferentially in root
CNT30573873 Vitis vinifera 18:33358401-33362396 (+) noncoding (-0.0004096)- 57 4.09 2
CNT30573872 Vitis vinifera 18:6789993-6790443 (-) noncoding (-0.028672)- 34 7.49 2
CNT30573871 Vitis vinifera 18:8914815-8918414 (-) noncoding (-0.045056)- 30 52.2 2Expressed preferentially in root
CNT30573870 Vitis vinifera 18:1576868-1577614 (+) noncoding (-0.0520192)- 79 0.15 3Conserved counterparts: CNT30536082, CNT30596736, CNT30559586, CNT30508904, CNT3021339, CNT30121049, CNT30708121, CNT30216750, CNT3035176, CNT30205386
Expressed preferentially in fruit
CNT30573868 Vitis vinifera 18:10652651-10654709 (-) noncoding (-0.0004096)- 98 12 2Expressed preferentially in root
CNT30573867 Vitis vinifera 18:22139897-22140649 (-) noncoding (-0.02048)- 50 6.55 1Expressed preferentially in root
CNT30573866 Vitis vinifera 18:8906081-8923718 (-) noncoding (-0.06144)0.000003 (sp|O22845|CML5_ARATH) 29 410.16 2Expressed preferentially in root
CNT30573865 Vitis vinifera 18:34278989-34279307 (-) noncoding (-0.0004096)- 41 4.74 1Expressed preferentially in root
CNT30573864 Vitis vinifera 18:12795898-12803739 (-) noncoding (-0.0004096)- 39 4.5 2
CNT30573863 Vitis vinifera 18:30134122-30169137 (-) noncoding (-0.0004096)- - 14.57 2
CNT30573862 Vitis vinifera 18:24947786-24948615 (-) noncoding (-0.045056)- 68 4.68 2
CNT30573861 Vitis vinifera 18:28312888-28313921 (+) noncoding (-0.12288)- 67 13.96 2
CNT30573859 Vitis vinifera 18:6337418-6357297 (-) noncoding (-0.0004096)- 30 6.27 5Expressed preferentially in root
CNT30573858 Vitis vinifera 18:27301894-27302450 (-) noncoding (-0.139264)- 58 1.95 2
CNT30573857 Vitis vinifera 18:30134682-30152523 (-) coding (0.234)- 94 6.63 2
CNT30573856 Vitis vinifera 18:28534787-28535681 (-) noncoding (-0.0512)- 76 0.84 2
CNT30573855 Vitis vinifera 18:1576862-1577484 (+) noncoding (-0.0765952)- 79 22.14 2Conserved counterparts: CNT30536082, CNT30559586, CNT30508904, CNT3021339, CNT30121168, CNT30708121, CNT30216750, CNT3035176, CNT30205386
Expressed preferentially in fruit
CNT30573854 Vitis vinifera 18:27486014-27497332 (-) noncoding (-0.221184)- 59 5.18 3
CNT30573853 Vitis vinifera 18:12088392-12091201 (-) noncoding (-0.0004096)- 71 8.41 2
CNT30573852 Vitis vinifera 18:10997397-11011646 (+) noncoding (-0.0004096)- 39 15.07 2
CNT30573851 Vitis vinifera 18:33892935-33939729 (+) noncoding (-0.049152)- 58 12.72 2