Detailed information on CNT3099992


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0JR25|IBBR_ORYSJ, E-value = 2e-95

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30106956Oryza rufipogonOryza longistaminata78.4747.1992.07328forward
CNT30603558Oryza rufipogonOryza punctata27.2713.6785.09114forward

Expression of CNT3099992

Peptides detected in this lncRNA

>peptide 1 (37 aa)
EQNFFTPFYFEYTSLKSWARHCLHMGPGWPVKRSLQT*

>peptide 2 (34 aa)
MQRQVGGFILLQKALSQQSPHGRGVQKGPGSAPQ*

>peptide 3 (32 aa)
MAPAPPGTTCTRRCTGWAPARRCSATAAGRASS

>peptide 4 (41 aa)
MSSQMSFPGNGPGASRHDLHAAVHWLGSSSSLQRHCGGSGFV

Sequence

>CNT3099992
ATGAACAAAATTTTTTTACCCCTTTCTATTTCGAATACACAAGTTTAAAATCCTGGGCCCGCCACTGTTTGCACATGGGCCCGGGCTGGCCGGTGAAGCG
GTCCTTGCAGACGTAGCGAGGCGGCTCCGACGACTCCACGCGCTGGCAATCCTTGCACGCGTCGGCGCACTCCTTCACCTCGTCCATGCAGCGGCAGGTC
GGCGGGTTCATCTTGTTGCAGAAGGCCTTGTCGCAGCAATCTCCCCATGGCCGCGGCGTGCAGAAGGGGCCCGGGTCGGCGCCCCAGTAGATGTCCTCGC
AGATGAGCTTCCCCGGGAATGGCCCCGGCGCCTCCCGGCACGACTTGCACGCGGCGGTGCACTGGCTGGGCTCCAGCTCGTCGTTGCAGCGCCACTGCGG
CGGGTCGGGCTTCGTCGG