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Detailed information on CNT3099789


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690632Oryza rufipogonOryza sativa83.559.9899.19496forward

Expression of CNT3099789

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MASERTYIFSRSYASELNGPIFLGTYRYHTYCWTVKILQYFD*

Sequence

>CNT3099789
GACGGCGGCGGCATGTGAGACGGCCAGCGGCAGTGCGTGTGGATCCCTAGATGCGGCAACTAGCGTGAAGTAGAGCACACATGGAAAGGCGTGGAGCTGA
ACGAGGAAGCTAGCTACCAAGCGAGCTGTTCAGTGGCTGGAGGAAACCCTCGACGGCAACACACAGTGGTGGTACCAAGGCCGGAGTGGTTGCGTTGCCG
GTCCGGCGGGTGACTCCGACTAATATGCTTCTGCCGCCGGCGGCAGTGCCAGAGGAGGAGGAGGCAACAACGGGGGAGTAGGCGCCGGCGGAGGAGGAAG
GGGACGCGGCGGTGGCAGTGAAGGAGGAGGACGTGGCGGCTGAGGAGTTGCCGCTGGAGGGCATGGAAGGGGAAAGGATTACGGCACACACGCGTGTGGG
CTGCGACTAGATGGCAAGCGAGCGCACCTACATTTTCTCCCGATCGTACGCTTCCGAATTGAACGGTCCGATCTTTTTAGGTACCTACAGGTATCATACC
TATTGCTGGACTGTAAAAATTCTACAGTACTTTGACTAAACTATACATGTAGTCACCATATTTGAAAGGCAAATATTTTAAAAATAATTCATAA