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Detailed information on CNT3099642


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690143Oryza rufipogonOryza sativa23.954.72100103reverse complement

Expression of CNT3099642

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MLLNPFLISSLLCCGIRITASLDVWTPEVSADSGRRQLLSLTDRVISLP*

>peptide 2 (30 aa)
MLKLEILTVNSDIFYFTLFIYDLQPIKVVF*

Sequence

>CNT3099642
ACCAATTCTCCTCTGGGCTAACTGAAATCTTAGAGGAGGATGAGTGAACTTATGCATGTTTTGATGCCAAATCAGCTAGCTAGTAGCTAGCTCTTGTAGG
TAGGTGGTAAAATGCTGAAGCTGGAAATATTAACTGTAAACAGTGATATATTTTATTTTACACTATTTATTTATGATTTACAACCGATAAAGGTTGTATT
TTAGAAAGTGCTACTGAATGGTTGCTGAAAAAAAATGCTACTTAATCCATTCCTGATTTCTTCTCTTCTTTGCTGTGGCATTCGGATCACTGCAAGCCTG
GATGTGTGGACTCCAGAGGTCAGTGCGGATAGCGGCAGGAGGCAGCTGCTATCTTTGACTGACCGGGTAATCTCTTTGCCGTGAACTGGATGGAATGGAA
GCTTTCGTTTATCATAAAGTTGTGATTGGG