Detailed information on CNT3099590


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690467Oryza rufipogonOryza sativa10075.2599.73371forward
CNT30574999Oryza rufipogonOryza barthii10099.7397.84371forward

Expression of CNT3099590

Peptides detected in this lncRNA

>peptide 1 (35 aa)
PRHTNCRDVDPNSTCGDRRHSLLLATLRLQLPRLG*

Sequence

>CNT3099590
CCACGCCACACTAACTGCCGAGATGTCGATCCCAATTCCACGTGTGGCGACCGGCGACACAGCTTGTTGCTTGCGACTCTGAGGCTGCAGCTGCCTCGCC
TCGGTTAGCTCTTGGCTCCTGCTTTCCCCCTCCTCGTCCGCTCGTCATCCTCGACTTGACCCTCGACAGTTCATCCTCAGACTGGTACTTGTCCATGGCG
ACCATCCCTTGGTCCCGGCCGAACCCGCTCATCTTGTACCCGCCGAACGGCGCGTCGGGGTCGAAGGCGAAGTAGCAGTTCACCCACACCGTGCCGGCCC
GCACTGACCTCGACACCATGTTGGCAATGTTGAGGTTCTTGGTCACAATGCCGGCAGCCAGCCCGTACTTG