Detailed information on CNT3099507


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690010Oryza rufipogonOryza sativa92.4739.3999.22258forward

Expression of CNT3099507

Peptides detected in this lncRNA

>peptide 1 (54 aa)
CRPRAGLELACRPPAGDELTCRPRAGEELSGVRAWGRSSPAIRAPGEELAGVRA*

>peptide 2 (68 aa)
AVRAPGWSSPAVRLRGTSSPAVRAPGRSSPAFAHGGGARLPSARQGRSSPASVREGGARRSSTYRGRS*

>peptide 3 (92 aa)
LPSARRVGARLPSACGGRAHLPSARRGGALRRSRMGEELACHPRARGGARRRPCVRVELAGRPPTGGGASRALIWAYVYIDRSMHMHACICFH

Sequence

>CNT3099507
CTGCCGTCCGCGCGCCGGGTTGGAGCTCGCCTGCCGTCCGCCTGCGGGGGACGAGCTCACCTGCCGTCCGCGCGCCGGGGAGGAGCTCTCCGGCGTTCGC
GCATGGGGGAGGAGCTCGCCTGCCATCCGCGCGCCAGGGGAGGAGCTCGCCGGCGTCCGTGCGTGAGGGTGGAGCTCGCCGGTCGTCCACCTACCGGGGG
AGGAGCTAGCCGTGCTTTAATTTGGGCATATGTATATATCGATCGATCGATGCATATGCATGCTTGCATATGCTTTCAC