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Detailed information on CNT30990


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 2e-67

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677834Zea maysSetaria viridis44.171.7390.59340forward

Expression of CNT30990

Peptides detected in this lncRNA

>peptide 1 (38 aa)
NEHVNIRRDLVIKLHKDHHAHLKSCHHRTSSQITIYCN*

>peptide 2 (32 aa)
MAMGAALLGREARIERANRKRREHWMMERRAAR

>peptide 3 (40 aa)
MHISNHATTVPAAKLQYTVINRRRSSLIWIPAGACGVREV*

Sequence

>CNT30990
AATGAACATGTAAATATAAGAAGAGACTTGGTAATAAAATTACACAAGGATCATCATGCACATCTCAAATCATGCCACCACCGTACCAGCAGCCAAATTA
CAATATACTGTAATTAATAGAAGAAGAAGTTCTTTAATTTGGATCCCGGCTGGGGCGTGCGGCGTACGTGAAGTGTGATTAGTCGAAGGTGGCCTTGCCG
GTGAACTTGACGTCGATGGGGTTGACGTTCTTGCCGATGCTGCGGAAGTTCTGGCCGACGCCCTCCCTGCCGGGGTTGACCTTCTCCGGGTAGACGCCGT
CCTTGGGGTGGAGGTACTGCACCTCGCCGTTGGGGCCCTCCCGCATGATGGCGGCGCCGCCGGTGGGCATCTCGAACACCTGCTCCTTGGGGGACGTCCA
CGTGATGACGTAGAACTCCTCCACCTGCGCCTTGCGGAGCAGCCCGCCCGTGCTGCCGCCGAAGATCGGGGACGGCGTGCTGGGGTCCAGCTGCGGGGCC
ACGAACCCCTTGGGCGCCTCCACCGCCTCCTCGGTGGACGCGCGGAGCGGGGCCGGCCCGCGGGAGGACGACGACGGCAGCGCGAGCTGCGAGCTCAGCT
GCCGCGGCTTCGCCGCCGGCGCCCAGGCGGCGGCCAGCAGGTGGCGCGTGGCGGCGGAGGCTTGCGTGGCCATGGCCATGGGCGCTGCGCTTCTTGGAAG
GGAAGCTAGGATCGAGCGAGCGAATCGCAAGAGGAGAGAGCACTGGATGATGGAGAGGAGGGCGGCGCGAG