Detailed information on CNT3097361


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-177

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30272606Solanum tuberosumChenopodium quinoa98.7855.1783.471131forward

Expression of CNT3097361

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVIVFPVSVLTKICIPPLKRSTKWSVDSFWIL*

>peptide 2 (37 aa)
MVSELSTSRVIVFPVNVFTKICIPPLRRSTKWRVDSF*

>peptide 3 (40 aa)
MVSELSTSRVMVFPVNVFTKICIPPRRRRTRWSVDSFWML*

>peptide 4 (55 aa)
MSSQKSAYHPLGAAPNGELIPFECCNLLESFHPQAVSQQKSTSAGQVGCLPYLEF*

>peptide 5 (57 aa)
MSSQKSAYHLADEGQGGVWTPFGCCSQLEFFHPPTVYRQRSISADLEEFLPYLGFLP*

>peptide 6 (58 aa)
EEQGEELTLSECYSQQGCDHPPAAYQQKSTSAGLVGYPPYPESSPSHYQWYLSSPPPR*

Sequence

>CNT3097361
CGAAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTATAGTCAGCAAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGGT
CTGGTGGGATACCCTCCTTATCCTGAATCTTCGCCTTCACATTATCAATGGTATCTGAGCTCTCCACCTCCAAGGTAATCGTCTTTCCAGTAAGTGTCTT
GACAAAGATCTGCATTCCTCCTCTCAAACGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATATTGTAATCAGCAAGAGTCCTACCATCCTCAAGCTGC
TTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGAATCCCTTCTTTGTCTTGGATCTTTGCCTTCACATTATCAATGGTGTCTGAACTTTCTACCTCCA
GGGTGATTGTCTTCCCAGTCAATGTCTTCACAAAAATCTGCATACCACCCCTTAGGCGCAGCACCAAATGGAGAGTTGATTCCTTTTGAATGTTGTAATC
TGCTAGAGTCCTTCCATCCTCAAGCTGTTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGGATGCCTTCCTTATCTTGAATTTTAGCCTTGACATTG
TCGATGGTGTCAGAACTCTCAACCTCAAGGGTGATGGTCTTCCCTGTCAATGTCTTCACAAAAATCTGCATACCACCTCGCAGACGAAGGACAAGGTGGA
GTGTGGACTCCTTTTGGATGTTGTAGTCAGCTAGAGTTCTTCCATCCTCCAACTGTTTACCGGCAAAGATCAATCTCTGCTGATCTGGAGGAATTCCTTC
CTTATCTTGGATTTTTGCCTTGACATTGTCAATAGTGTCAGAGCTCTCAACCTCAAGAGTAATTGTCTTCCCAGTCAAGGTTTTCACAAAGATCTGCATG
CCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGAGTTCTACCGTCCTCTAATTGCTTTCCAGCAAAGATCA
GCCTTTGCTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTGCCTTAACATTATCGATTGTGTCAGAACTCTCAACCTCGAGAGTTATGGTCTTGCC
AGTAAGGGTCTTAACAAAGATTTGCATCTATAATTAATCAAAAAG