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Detailed information on CNT3092670


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10716|CYSP1_MAIZE, E-value = 8e-67

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519738Solanum tuberosumSetaria italica19.322.3881.75126forward
CNT30376514Solanum tuberosumArabidopsis thaliana15.0133.2282.6598forward
CNT30143899Solanum tuberosumMedicago truncatula10.4133.6685.2968forward
CNT30218447Solanum tuberosumKalanchoe fedtschenkoi11.7925.1685.7177forward

Expression of CNT3092670

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MFKQVGSNFALVKVAFAILASVRIVFLQLETSRFQGILKGTSHKTTAATGITIIF

Sequence

>CNT3092670
ATTTGCAGTATAAACTACAGATACAAATCCCAGTACATGGTTTGAGGCACGATAATAAGGTGCTAATGAAATCTAAGACATGAGTTCACAATACATTACT
GACCGATATATTTACAAAGATTAGGACCATGGCATCAACTCCACAGATATTGTGACCCCTGCAGATCTTGTAATATCCGTGTTCTCCCCAAGTCTTTCCC
CAAGAGTTCTTGATGATCCAGTAAGGCTTATTCTTGAGACGGATAGGTGCAAAACCTTCAGAACCATAACCAACTAGGAGGACACCATGATCCTGACGCT
TGAGGCAAATTAATGGGCATGAAACTCCTCTAACGTATGTCTGCATCCAAGCAGCATTGATCCCCACTGCAATTTACACCCAAAAAGAAAATCGATAAGT
TTTCTGGTTTGCTCTCATTCACAAACTAGCAAACAACTTCAACTTAAGCCTTTAGTTTATTATAGCTACATTACCTGCAAGAGGACCATGTTTAAGCAGG
TTGGCAGCAATTTTGCTCTTGTCAAAGTGGCATTTGCCATCCTTGCCAGTGTAAGGATAGTCTTTCTCCAGTTGGAGACCTCCAGATTTCAGGGTATACT
CAAAGGCACTAGTCATAAGACCACCGCCGCAACCGGCATCACAATCATTTTTT