Detailed information on CNT309022


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671253Zea maysSetaria viridis33.1833.3391.6772forward
CNT30303844Zea maysTriticum aestivum26.2723.0889.4757forward
CNT30555334Zea maysOryza glaberrima26.2717.3887.7257forward
CNT30666847Zea maysTriticum dicoccoides26.2722.8989.4757forward
CNT30137123Zea maysLolium perenne26.2710.5289.4757forward
CNT30348724Zea maysEragrostis tef26.276.5389.4757forward
CNT30592895Zea maysEragrostis curvula22.129.2591.6748forward

Expression of CNT309022

Peptides detected in this lncRNA

>peptide 1 (37 aa)
EVEERSLVHLDELRVPALERDHPLVFALGRHRWIDER*

>peptide 2 (42 aa)
RSKSVAWSTLTNFASQLLSVIILLFSPSDAIDGSTRDEATKP*

Sequence

>CNT309022
GAGGTCGAAGAGCGTAGCCTGGTCCACCTTGACGAACTTCGCGTCCCAGCTCTTGAGCGTGATCATCCTCTTGTTTTCGCCCTCGGACGCCATCGATGGA
TCGACGAGAGATGAGGCGACGAAACCCTAGCTAGTTGCAGCGATTTGATCTGTGATGGTCGATTGCGAGGGAAACGCCTCTCCTGACTACTTTTCCTTCG
ATTCGCCTGCCCTGCCC