Detailed information on CNT3081767


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30637495Brassica junceaCapsicum annuum35.3635.3693.28134forward
CNT30227733Brassica junceaAnanas comosus35.627.0288.15135forward
CNT30687283Brassica junceaTriticum urartu22.165.7588.184reverse complement
CNT30360935Brassica junceaLactuca sativa30.8721.2793.16117forward
CNT3035080Brassica junceaCucumis melo53.033.8486.07201reverse complement

Expression of CNT3081767

Peptides detected in this lncRNA

>peptide 1 (53 aa)
PALSKGFILHHSPRRSLIFILSCDSFSSFFSSVCASFFLPCFPLVKPTILFSK*

Sequence

>CNT3081767
CCCGCACTAAGTAAGGGTTTCATTCTGCATCACTCTCCCCGTCGTTCTCTCATTTTCATTTTATCTTGTGACTCATTCTCTTCTTTCTTTTCGTCTGTTT
GTGCATCTTTCTTTCTCCCATGCTTTCCGTTGGTCAAACCAACGATTCTCTTCTCAAAGTAATAGAGAGATCCTTTTCTAGTTAGACTTCTATCAATGCA
ATGAAAGAACCATCCCTTCCTATTAGTTTGTCCTGTCAGATAGAAAGAAAATTAGACCCCAAAGAGAAAGAGCCCGTTGGGGGGTGAAGGGTGGGGGTTT
ACATACAACCGAGACAAAGTGGTTTATGATTGAATCTCAGAGGCATTCTTATCATTCAGTTTCCTCGTTCTATTTAATG