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Detailed information on CNT3078164


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30115210Brassica junceaEutrema salsugineum28.6752.4493.8129forward

Expression of CNT3078164

Peptides detected in this lncRNA

>peptide 1 (32 aa)
RVSRVSLLINGQLSSRLKISLSLSSISASLFI*

Sequence

>CNT3078164
AACGAGTTTCTAGGGTTTCGTTGCTTATAAATGGGCAACTGAGCTCGCGACTCAAAATCTCTCTCTCTCTCTCTAGCATCTCCGCCTCTCTTTTCATCTG
AATCTGAACACAATCCGAGGAGAGAAAGGTTAAGATCTTCTGCGAAAACAGCATGAGAGCTAAGTGGAAGAAGAAGCGTATGAGGAGGTTGAAGAGGAAG
AGACGAAAGATGAGACAGCGATCTAAGTAGTTTTCCGAGACCGACATTTGTTGTCCTTGATTATCTCATCCACTTTGCCCGTGTACTCTCGCATTACCTG
AGAAAAAAAAGAGAGGATTAAGAAAGTTCATCATTTTGGTTCCTATCTCAATCATCAAGACGAGAATAGAGTATATGAGGAGAGCCTAGTATAAATCACC
TGGAGAAGATACGGGAAGGCAAAGTCGACCATGTTGTTCAACCATGCAAG