Detailed information on CNT3075716


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30262654Brassica junceaBrassica rapa54.318.1199.31145forward

Expression of CNT3075716

Peptides detected in this lncRNA

>peptide 1 (45 aa)
AGFSDLEDFWDDLPVSRLEVVWKSSGLLGSLRTKSSGLPGSRLDF*

>peptide 2 (88 aa)
MQVFQIWKTSGTTYLLVVWKSSGSRLDFLEVFGQSRLDFQEVVWTSRKSWYSSSTNLKVFQIWKTSGTTYLLVVWNSSGSRLDFLKVV*

Sequence

>CNT3075716
ATGCAGGTTTTTCAGATCTGGAAGACTTCTGGGACGACTTACCTGTTAGTCGTCTGGAAGTCGTCTGGAAGTCGTCTGGACTTCTTGGAAGTCTTCGGAC
AAAGTCGTCTGGACTTCCAGGAAGTCGTCTGGACTTCTAGGAAGTCATGGTACTCATCTTCCACTAATTTAAAGGTTTTTCAGATCTGGAAGACTTCTGG
GACGACTTACTTGTTAGTCGTCTGGAATTCGTCTGGAAGTCGTCTGGACTTCCTAAAAGTCGTCTAG