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Detailed information on CNT3073453


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30120885Brassica junceaCitrus clementina87.0396.0995.12369forward

Expression of CNT3073453

Peptides detected in this lncRNA

>peptide 1 (41 aa)
SSTRPQVRRDHPLSLSISISGGKETNKDSLSNGERTGKSPA*

>peptide 2 (41 aa)
MQPQSGGKFRPRLNMGERPIANKYREVKMKRTLKRESKRFP*

Sequence

>CNT3073453
GTCCTCAACGCGACCCCAGGTCAGGCGGGATCACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGC
GAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGACGTCTTCGGCGTTCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGACGGACCGGGCCCAAGTTCCC
TGGAAAGGGGCGCCAGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCC
AATCGGGCGGTAAATTCCGTCCAAGGCTAAATATGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTTTGAAAAGAGAGTC
AAAGAGATTCCCTTAGTAACGGCA