Detailed information on CNT3073293


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377324Brassica junceaArabidopsis thaliana37.0916.1689.22102forward

Expression of CNT3073293

Peptides detected in this lncRNA

>peptide 1 (40 aa)
SDSTHRLDRNPLRRSYTLHRRPSDLRAQEPLMRFAAELVD*

>peptide 2 (30 aa)
LIQRTVSIEIPFVDHTPYIVVRQISEPKNR*

Sequence

>CNT3073293
TCTGATTCAACGCACCGTCTCGATCGAAATCCCCTTCGTCGATCATACACCTTACATCGTCGTCCGTCAGATCTCCGAGCCCAAGAACCGCTGATGCGTT
TCGCCGCAGAGCTCGTCGATTAAACCTTCTCCTCCGAGTTTTCCGGCCATGGCGGGGAAGAAGTCGTGGAAAGTGGGTTGTGGGTTTTGGTGGGTCGGTC
TTGTTGAGGATTGAGGAGTCGCCATTTGAGCTATAGAGTGAGAGAAATTGAGAATTTTGAGAGATGGGTTTTGTA