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Detailed information on CNT30726236


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000220, E-value = 1e-100

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521842Lupinus angustifoliusSetaria italica72.7563.9282.2590forward
CNT30403515Lupinus angustifoliusBeta vulgaris28.8591.0586.75234forward
CNT30555279Lupinus angustifoliusOryza glaberrima32.5584.6286.36264forward
CNT3075316Lupinus angustifoliusBrassica juncea31.8186.8785.66258forward
CNT30597159Lupinus angustifoliusOryza meridionalis22.4425.1486.26182forward
CNT30147962Lupinus angustifoliusBrachypodium distachyon24.4158.4184.34198forward
CNT30575645Lupinus angustifoliusOryza barthii40.3238.5685.93327forward

Expression of CNT30726236

Peptides detected in this lncRNA

>peptide 1 (35 aa)
KFKHNIAEHRSDITISISETRQGHQNNAYKQTTKA*

>peptide 2 (43 aa)
MRSNLWSMRENTSATLVEFEIMHTALCTLARSPPGTTVGGWCM*

Sequence

>CNT30726236
CAAATTTAAACACAATATAGCAGAACACAGATCAGATATCACTATCAGTATTTCAGAAACAAGACAGGGGCATCAAAACAATGCATACAAACAAACCACA
AAAGCATAGTTCTGGTAGAATCTGAACAGCGCACATAATAGAGAAAAATCAATACAAGAAACAAGAGCACCAGCATCTGAAAGAGACTCTAGTAGTCTTC
AATGTCATCATCACCACCTTCAGCAGACTCAGCACCAACTTCTTCGTAATCCTTCTCAAGGGCAGCAAGATCCTCACGAGCTTCAGAAAACTCACCTTCT
TCCATACCCTCACCCACATACCAGTGGACAAAAGCACGCTTGGCATACATGAGATCAAACTTGTGGTCAATGCGAGAAAACACCTCAGCCACACTGGTTG
AGTTTGAAATCATGCACACTGCCCTCTGCACCTTGGCAAGGTCACCACCAGGAACAACTGTAGGTGGTTGGTGTATGTAGGACGCTCAATGTCAAGAGAG
CGCCTGCAAATGTCATAAATAGCTTCATTATCTAAAAGAATGGACACATCAGTGTGCTCTAGGAGGGAGTGGGTGGAGAGGACACTGTTGTATGGCTCAA
CAACAGAGGTTGAGACCTGAGGAGAAGGGGTAAACAGTGAACCCAAGCTTTGATTTCTTTCCATAATCAACAGACAAACGCTCCAACAGAAGGGAACCGA
GACCAGAACCAGTTCCTCCACCAACAGCATTGAAAACCAAGAAACCTTGGAGACCAGTGCAGTTATCAGCAAGCTTCCTAATGCGGTCCAAGCACAGATC
AACGATCTCTT