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Detailed information on CNT30724478


BLAST search results

BLAST vs Swiss-Prot:
sp|O22582|H2B_GOSHI, E-value = 3e-59

BLAST vs NONCODE:
NONGMAT000269, E-value = 8e-52

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675321Lupinus angustifoliusSetaria viridis11.9425.5390.2872forward
CNT30315505Lupinus angustifoliusCorylus avellana26.234.5781.65158forward
CNT30379403Lupinus angustifoliusManihot esculenta44.9448.2279.34271forward
CNT30526697Lupinus angustifoliusPhaseolus vulgaris41.2994.6884.34249forward
CNT30632073Lupinus angustifoliusVigna unguiculata39.1431.3884.32236forward
CNT30200521Lupinus angustifoliusPisum sativum52.2453.6683.81315forward
CNT30163372Lupinus angustifoliusPistacia vera21.2322.2282.03128forward
CNT3094085Lupinus angustifoliusSolanum tuberosum45.1153.8682.72272forward
CNT30284042Lupinus angustifoliusTriticum aestivum9.6228.1691.3858forward
CNT3086649Lupinus angustifoliusVigna radiata27.221.9883.54164forward
CNT3013020Lupinus angustifoliusZea mays9.4525.9191.2357forward
CNT30606042Lupinus angustifoliusGossypium raimondii31.3461.9781.48189forward
CNT30205622Lupinus angustifoliusHelianthus annuus12.2727.4185.1474forward
CNT30679698Lupinus angustifoliusTriticum urartu10.7822.9790.7765reverse complement
CNT30346527Lupinus angustifoliusEragrostis tef7.320.8590.9144forward
CNT30363871Lupinus angustifoliusSorghum bicolor11.9420.5790.2872forward
CNT30360275Lupinus angustifoliusLactuca sativa24.2132.6684.93146forward
CNT30429187Lupinus angustifoliusPapaver somniferum33.3319.2981.09201forward
CNT3024772Lupinus angustifoliusPopulus trichocarpa46.9347.7280.21283forward
CNT3099564Lupinus angustifoliusOryza rufipogon9.7828.9289.8359forward
CNT30174435Lupinus angustifoliusVigna angularis44.1139.785.34266forward
CNT30114697Lupinus angustifoliusEutrema salsugineum41.6340.9578.88251forward

Expression of CNT30724478

Peptides detected in this lncRNA

>peptide 1 (45 aa)
YILLGNRQAKIRIKQRIRSYIKRSTKKNQPANKIVIVPDWISQES*

Sequence

>CNT30724478
TACATACTCCTGGGCAATAGACAAGCAAAAATAAGAATTAAACAAAGAATTAGGTCCTACATAAAACGGAGCACAAAGAAAAATCAGCCAGCGAATAAAA
TTGTAATTGTACCAGATTGGATAAGTCAGGAATCATAAAAAGATACTACTCGTTACAGCATACAGTCTTATAACGAACAATCTCCATACACAAGGGGTCA
AGAAAACCGACTTGACAATTCTTTTTTAACCTAACGAAAGGAAAAAGAAAATAAAAAGAGGATTTTAGATCTAAGAGCTTGTAAACTTTGTAACAGCTTT
TGTTCCTTCAGAGACAGCATGTTTAGCCAATTCACCAGGCAACACAAGCCTCACAGCTGTTTGAATCTCCCTTGAAGTTATTGTAGGTTTCTTGTTGTAA
CGAGCCAATCTAGAAGATTCCTGAGCAAGCTTCTCGAATATATCATTTATGAAACTATTCATTATTCCCATTGCCTTAGAGCTTATACCAATGTCTGGGT
GAACCTGCTTCAACACCTTGAATATGTAGATCTTGTATGTCTCCACGCTCTTCTTGCTTTTCTTTTTCTTCTTGTCAACGGCGGCGCCACCTTCCTTTGG
TAG