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Detailed information on CNT30724464


BLAST search results

BLAST vs Swiss-Prot:
sp|P26863|RT01_MARPO, E-value = 1e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670545Lupinus angustifoliusSetaria viridis32.1434.2688.15135reverse complement
CNT30207841Lupinus angustifoliusHelianthus annuus27.384.2990.43115reverse complement
CNT3054162Lupinus angustifoliusAmborella trichopoda22.8644.0489.5896forward
CNT3050527Lupinus angustifoliusCucumis sativus52.1436.5688.13219forward

Expression of CNT30724464

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MMSIYLSRSFPRSNSSLFLCSGKALQSEVLRLGEEMFLVDAGPGTAIICMQDEPTGVPINRATRFEKKVGSLDLVAGESLMKKKIL

Sequence

>CNT30724464
CATGAGGGAGGAGTATAATCCGATGCCTTTTGAAGGTAAGGCTAAAGGAGAATATTTTCACCAGAGTAGATAATCTGGATGATAACTCCACTACTTAATG
GTGCTACTGGATGCTTCTGATCAATAGAACAGGAACAGGAAGAGGAGGAAAAAAAAGCTTATGATGAGCATCTATTTGAGTCGATCATTTCCAAGATCTA
ATTCAAGTTTATTCTTATGTAGTGGAAAGGCCTTACAATCTGAAGTTTTACGCTTAGGGGAAGAAATGTTCTTGGTGGATGCAGGACCTGGGACCGCCAT
AATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCACCAGGTTTGAGAAGAAGGTGGGATCCCTGGATCTAGTGGCTGGTGAATCACTG
ATGAAAAAGAAGATTTTGGA