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Detailed information on CNT30719750


BLAST search results

BLAST vs Swiss-Prot:
sp|P33628|TBA_PICAB, E-value = 6e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677979Triticum speltaSetaria viridis98.3224.6691.88234forward
CNT30522084Triticum speltaSetaria italica41.1832.1393.8898forward
CNT30317272Triticum speltaCorylus avellana82.3550.3984.18196forward
CNT30372848Triticum speltaArabidopsis thaliana60.0823.8389.51143forward
CNT30493173Triticum speltaOlea europaea57.1432.9383.82136forward
CNT30300679Triticum speltaTriticum aestivum88.2496.7788.1210forward
CNT30562914Triticum speltaActinidia chinensis10078.2981.93238forward
CNT30555317Triticum speltaOryza glaberrima57.5647.991.97137forward
CNT3079816Triticum speltaBrassica juncea47.4841.0991.15113forward
CNT30446069Triticum speltaSaccharum spontaneum48.745.1183.62116forward
CNT30135921Triticum speltaLolium perenne85.2953.9993.1203forward
CNT3065Triticum speltaZea mays97.4895.0890.52232forward
CNT3041226Triticum speltaChlamydomonas reinhardtii42.8620.6583.33102forward
CNT30609153Triticum speltaGossypium raimondii88.6652.183.89211forward
CNT30648424Triticum speltaRosa chinensis86.5564.1787.38206forward
CNT30129276Triticum speltaCorymbia citriodora76.4743.5487.36182forward
CNT30716299Triticum speltaMalus domestica golden99.1638.8886.44236forward
CNT30579614Triticum speltaEchinochloa crusgalli89.9254.1891.12214forward
CNT30496537Triticum speltaDigitaria exilis48.7451.3387.93116forward

Expression of CNT30719750

SRR9114152: 0.0 RPKM

Peptides detected in this lncRNA

>peptide 1 (78 aa)
GVMTTGEVVGCILLATDKLLGVEELAVSASPHLINHSGLEIYEDSTGDVLPSPSLAEEGVESIITSPNGLVTGHLAIRL

Sequence

>CNT30719750
TGGTGTAATGACCACGGGCGAAGTTGTTGGCTGCATCCTCCTTGCCACTGATAAGCTGCTCGGGGTGGAAGAGCTGGCGGTAAGCGCCAGTCCTCACCTC
ATCAATCACAGTGGGCTCGAGATCTACGAAGACAGCACGGGGGACGTGCTTCCCAGCCCCAGTCTCGCTGAAGAAGGTGTTGAAAGCATCATCACCTCCC
CCAACGGTCTTGTCACCGGGCATCTGGCCATCAGGCTG