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Detailed information on CNT30714701


BLAST search results

BLAST vs Swiss-Prot:
sp|P05993|PAPA5_CARPA, E-value = 2e-49

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376792Malus domestica goldenArabidopsis thaliana8.3436.4283.61122forward
CNT3070872Malus domestica goldenQuercus suber15.7230.9186.09230forward
CNT3046025Malus domestica goldenPrunus dulcis30.953.5589.38452forward
CNT3085308Malus domestica goldenVigna radiata9.9121.3980.69145forward
CNT30311982Malus domestica goldenCamelina sativa7.1128.4287.5104forward
CNT30599767Malus domestica goldenFraxinus excelsior8.4830.0285.48124forward
CNT30653768Malus domestica goldenRosa chinensis12.444090.66182forward
CNT30410960Malus domestica goldenPapaver somniferum7.7928.4382.46114forward
CNT30704623Malus domestica goldenPrunus avium36.8422.9689.8539forward

Expression of CNT30714701

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MQQFCSCQICRFHDQYQCMDNPLPSLVHQL*

>peptide 2 (40 aa)
WTFKLFGQTPRIIRYMGCYVCLVICLASPTEDSKQLEFAR*

>peptide 3 (44 aa)
MTLHQHMFAAIWSSSREMTLKLETDAAILLLSNLQVPRSVPVYG*

Sequence

>CNT30714701
ATGGACATTTAAGCTGTTCGGGCAAACACCGAGAATTATAAGATACATGGGGTGTTATGTTTGTTTGGTCATTTGTTTAGCAAGCCCGACAGAAGACAGC
AAACAACTGGAGTTTGCCCGATAAATATCACCACAACTGTATATACATTAAACAGAACTGCTATTGTAAGTTAGGGTTGAACCCTACTACTCTGAGTTGG
TCTTAACCGAAGCTGCAGCAACAGTCGAGACCATGGAGTCCACGCCACAGATGTTTCGGCCCCTGCAGATTTTGTAGAATCCACTCTCTCCCCAGTTCTC
TCCCCATGAGTTCTTAATAATCCAGTATGGCTTCTCCTTCAATCTGATGGGAGAATACCCAGCTGCACCATAACCTACGAGTAACACTCCGTGATCCAAC
CGCTTTGAGCATATGTAGGGGCATGACACTCCACCAACATATGTTTGCAGCAATTTGGTCTTCATCAAGGGAGATGACGCTGAAATTGGAAACTGATGCA
GCAATTTTGCTCTTGTCAAATTTGCAGGTTCCACGATCAGTACCAGTGTATGGATAATCCTCTTCCTTCATTAGTCCACCAGCTTTGAGTGTGACTCAAA
GGCACTGTTCATGAGTCCACCGTTGCACCCGGAGTCACATGAACCTGCCTCCTCTGGATCACACTGCACAATGTTCAGAAAGAACGCGTAAGAAACAGCA
AATCAAGGGAAACACCATTTTGTAGGAGTCATCATAGAATGACTGCAAAAGTCGAGCAGTTCTATTGCTAAAAAAGAACTTGATAACACCATTCGACATG
CATTGCTAATGTATTATCAAAGATTAACAACTGAATTGCAACACACTTAGAATGAAAATGGCGCTTCATGAGTGGCAGCGCAAACATGTCATCGGCGCTC
ATTAAAAACAAGAACCAATTCTGTTCCAAATCTTTCTACACAACAAGCAAATAACAATCACTTAACCTTTTATATAACCAGAACCCGGCATCAATTCTGA
TTTACTAATTAACATCCGTAACCACACCCTAACAAAACAGCAGATATAACAATCACAACACACAGACCATTTCTCCTGCAACTTATAAACTATGTCCACG
ATTTTCACTAATTCCTTACAAGTTCCGACCATTTCCATTTTCCTTTTGACATGTCTGGAGAATTAGGAACATGTAAACACAGAGGGTAATGTTATAAATG
CAAGCAAAAAGTTCAAGTTTGTGTCTTTCAGCACTGACAGACAAACACAGACAAAGACAAAGTAGAAATTGAGGAAGATAACTATTTATCCTCGTCCAGA
TTACATGTGGGCATCACCACATACACACATCATTTGAACAAAACAATTGTAACAAACATTCTGAGACAACTGCCAATCAAATTAAACAATTCAACCAATC
CAAATCCCCAAAATATATACAAATCAACAAAACCAGAAAAGAGCAAGAAAAGGTCAAACCTCA