Detailed information on CNT30710681


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548370Glycine maxIpomoea triloba10.6433.0584.4277forward
CNT30375565Glycine maxArabidopsis thaliana7.3221.4694.3453forward
CNT30728842Glycine maxCorchorus capsularis19.4840.6383.69141forward
CNT3070603Glycine maxQuercus suber15.753089.47114forward
CNT30632211Glycine maxVigna unguiculata24.8659.2193.33180forward
CNT30221132Glycine maxHordeum vulgare9.8130.7485.9271forward
CNT30568278Glycine maxActinidia chinensis15.4722.7281.25112forward
CNT30145515Glycine maxMedicago truncatula15.4745.7192.86112forward
CNT30435838Glycine maxAegilops tauschii9.8128.5185.9271forward
CNT30680173Glycine maxTriticum urartu9.8129.2285.9271forward
CNT30120512Glycine maxCitrus clementina16.4439.886.55119forward
CNT30724415Glycine maxLupinus angustifolius19.224.1788.49139forward

Expression of CNT30710681

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLFGTPWPKRCPKCQPHHSRCHLPLYQSAFCSQ*

>peptide 2 (36 aa)
SETPCWVNASTSNWDCSQVNHEHGKSNRKWRQYLFA*

>peptide 3 (29 aa)
MIVSYSILHLISRFFYKKQIIIKNIRFVS*

>peptide 4 (94 aa)
MYAYRNMGIPSVPLRVSGREDSVDKNEGTNNLSTQSSTIVVAISNRVGTTSIPVVVCFLEPLGPSDAQNANPITVGATYRCISLPFVANNGEHSD

Sequence

>CNT30710681
CTCCGAAACTCCTTGCTGGGTTAATGCCAGTACCAGTAATTGGGATTGTAGCCAAGTGAACCATGAACACGGCAAATCCAATAGGAAGTGGCGCCAGTAC
CTTTTTGCATAAGGCAAAGAGATAAATTAGAAAAGAGATGCATAGAAGAGGTGATATTTATAATGAATTAATAATGATAGAAAATTATTATAGAAACTAT
TAGACCACTATAGTCTCGAATAATTTTTAAACAACACACAACTATTTTATTTCCAATTTACAAATAAAACATAGTTATGTGGATTAGAAAATTATCTAAA
CTATGATAGTCTCATACTCTATACTACATCTCATCTCTCGTTTTTTTTATAAGAAACAAATAATAATAAAAAATATACGATTTGTTTCTTAAAAAAAAAA
AAAGACTGCTGGTAGTAATAATTTTTCTTAAATAATGTATGTATGCTTACAGGAACATGGGAATCCCTAGCGTTCCTCTTAGGGTCAGTGGCAGAGAAGA
CAGTGTAGACAAGAACGAAGGTACCAATAATCTCAGCACCCAAAGCAGTACCATTGTTGTAGCCATCAGCAACAGAGTTGGCACCACCTCCATACCTGTT
GTAGTATGCTTTTTGGAACCCCTTGGCCCAAGCGATGCCCAAAATGCCAACCCCATCACAGTCGGTGCCACCTACCGTTGTATCAGTCTGCCTTTTGTAG
CCAATAATGGTGAGCACAGTGACA